| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3867 |
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| Symbol | |
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| ID | 4074930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 119769 |
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| End bp | 122123 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004524 |
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| Product | Alpha-glucosidase |
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| Protein accession | YP_611259 |
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| Protein GI | 99078000 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.191857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGTC TTAAAATCTG GGCTTTGGAA GCGGAAACCA CCACAGGTGT GATTTTGCGC
GTCGAAGGCC GCCACCTACT GCATATATCT GTACTGGAGG AAAACAGGTT TCGCGTATCT
CTGCAAAAAG ACGCAGAGTG GCGCTTGGAG CGAACATGGA CTGTGGCGCC TGCCGGGGAT
GCCCCATGGG AGGGCCGTCG GCGCGAAGAC ATCTCTGGCT TTTCCTGCCC GCCCCCGCAG
CTCTCGCAAA ACGAGACTGA ACTCGTTTTG TCGACTGAGA CAATGCGGCT TCGTATTTTG
GCACCGCTAC AGATGGTGTG GGAGGCCAAG GTGAACGGAG CATGGAAAGC CTTCGCCGAG
GATCGCCCAA CCGGAGGCAT TCACTTGGGC CTGCGGGATC ATGCCCATGC GCATTTTCTA
TCCCGACACC CGCAAGAACC GGTTTTTGGA CTTGGCGAAA AGACAGGCCC GCTTAACCGT
GTTGGTCAGC GCTACGAAAT GCGCAACTTA GATGCGATGG GTTACGATGC TGAGCGCACT
GACCCACTCT ACAAGCACGT GCCCTTCACT CTGACGCGGA CACAAACTGC CGGGTGTTGG
TCCATCTTTT ACGATAACTT GGCTAGTTGC TGGTTCGATT TCGGCAATGA ATTGGACAAC
TACCACGCCC CTTATCGCGC CTATCGTGCC GAGGATGGCG ATCTCGATTT TTATATGACA
TGGGCGCCTG AGTTGCTCGA CTTGGTCAAA CAACAAGAGC GATTGACCGG CGGCACCGCC
TTTCCGCCGC GTTGGAGCCT TGGGTACTCT GGGTCAACAA TGTCCTACAC AGATGCACCG
GACGCACAGG CGCAGCTGGA AGGTTTTCTA ACTAAGATTG CAGAGTATCG TATCCCTTGT
GACAGTTTTC AGATGTCGTC GGGCTACACC TCGATAGGGC CGAAGCGGTA TGTGTTCAAC
TGGAATGATG AGAAGGTGCC CGACCCTGCG GCTATGGCGG CAAAATTTGC CGATAAGGGG
GTGCATCTCA TTGCCAATAT CAAACCTTGC CTGCTGCAGG ACCATCCGCG TTACGCCGAA
GTCGCCAACG CAGGGTTGTT CGTGCAGGCG AGCGCAGAAG CGGACACGAA CTGCGGACCA
GAACGCTCGG TCTTTTGGGA CGACGAAGGC TCGCATCTCG ACTTTACTAA CCAAGCGACT
GTGGATTGGT GGAAGCAAAA TATCGGCGAG GCGCTGTTGC AGCGCGGTAT AGGCTCAACC
TGGAACGATA ACAACGAATA CGAAATCTGG GACCGACACG CTCAATGCGC GGGTTTCGGT
AAGGCAATCG ACATGTCGCT AATGCGTCCT GTAATGCCCA TACTTATGAC GCGCGCATCA
ATGGAGGCGC AGGAGGCCCA TGCACCGGAG AAGCGGCCCT ACCTAATCAG TCGATCAGGC
GCCCCGGGAT TGCAGCGTTA TGCCCAGACT TGGAGCGGAG ACAATCGCAC AGATTGGAAG
ACGCTGCGCT GGAACCAGCG GATGGGCCTC GGCATGAGCA TGTCTGGCTT TTATAACATT
GGACATGACA TCGGTGGCTT CTCTGGGCCG CGGCCAGAAC CGGAGCTGTT TGTGCGCTGG
GTCCAAAATG GTGTGTTCCA TCCTCGTTTT ACCATTCACT CATGGAATGA TGATGCGACA
GTAAACGAGC CTTGGATGTA TCCTGAGGTG ACGGACCACA TCCGCGCGGC GATAGAATTG
CGGTACCAAC TTCTGCCTTA TCTCTACACC TGCCTGTGGC AGGCGGCCGA GCGCAGTGAG
CCGATGCTAC GACCTTTGTT CCTTGATTTT GGTGCTGACC CTCAAGCTTG GGAGGAGAGC
GATAGCTTTC TTCTCGGGCG GGATCTCTTA GTGGCGACAG TCTTGGACAA GGGTGTTGAT
GCGATCTCGG TCTATTTACC GCGGCATTCC GGGGGCTGGT GGGATTTCCA CACTGGTCTT
TGGCACGAAG GCGGACAATG GCTCACCGTG CCTGTCGCTC TTGATACCAT TCCGCTGTTT
ATCCGCGGGG GCGCCGTGGT TCCGATGGGC CAAGGGGCAG ACCGCGCAGC ACCCGAGATG
GAGATCGCGC GACTTTTGGC TGTGTTCCCC GCGCAAGGCG TACAGGAAAC GACCAGCCTC
CTCTATGAGG ATGACGGTGT GACAAAGACG GGTAAGTGGT GCCTGTCTCA TCTCGTCTTG
AACAGCACCA ATGACCACAT CAGCCTGATC TCGAAACGTG AGGGTAATGG CGCGCCGGTT
TTACCAGAGG CACTGGTGGT CCTGCCGGCT GGTGAACGAC GCATTCTGAA GACGGGAACG
AGGATCGACT TATGA
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| Protein sequence | MKCLKIWALE AETTTGVILR VEGRHLLHIS VLEENRFRVS LQKDAEWRLE RTWTVAPAGD
APWEGRRRED ISGFSCPPPQ LSQNETELVL STETMRLRIL APLQMVWEAK VNGAWKAFAE
DRPTGGIHLG LRDHAHAHFL SRHPQEPVFG LGEKTGPLNR VGQRYEMRNL DAMGYDAERT
DPLYKHVPFT LTRTQTAGCW SIFYDNLASC WFDFGNELDN YHAPYRAYRA EDGDLDFYMT
WAPELLDLVK QQERLTGGTA FPPRWSLGYS GSTMSYTDAP DAQAQLEGFL TKIAEYRIPC
DSFQMSSGYT SIGPKRYVFN WNDEKVPDPA AMAAKFADKG VHLIANIKPC LLQDHPRYAE
VANAGLFVQA SAEADTNCGP ERSVFWDDEG SHLDFTNQAT VDWWKQNIGE ALLQRGIGST
WNDNNEYEIW DRHAQCAGFG KAIDMSLMRP VMPILMTRAS MEAQEAHAPE KRPYLISRSG
APGLQRYAQT WSGDNRTDWK TLRWNQRMGL GMSMSGFYNI GHDIGGFSGP RPEPELFVRW
VQNGVFHPRF TIHSWNDDAT VNEPWMYPEV TDHIRAAIEL RYQLLPYLYT CLWQAAERSE
PMLRPLFLDF GADPQAWEES DSFLLGRDLL VATVLDKGVD AISVYLPRHS GGWWDFHTGL
WHEGGQWLTV PVALDTIPLF IRGGAVVPMG QGADRAAPEM EIARLLAVFP AQGVQETTSL
LYEDDGVTKT GKWCLSHLVL NSTNDHISLI SKREGNGAPV LPEALVVLPA GERRILKTGT
RIDL
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