| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3772 |
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| Symbol | |
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| ID | 4074944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 16148 |
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| End bp | 17152 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004431 |
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| Product | hypothetical protein |
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| Protein accession | YP_611167 |
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| Protein GI | 99077908 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.0602576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CGCTAAGCGA GGCCGGAGGC TATCCCCCCG AAGGACAGGG GGCGTATTTC
CTCTGCGATA TCTTTGATGC GATGCCTAAG AATGATCTGG CTTCGATGGA GCATCCGTTG
TTTTCCCTCA GCACGCGCCC GGACCGGCGC ATCCTGAACT ACGAACACAA TGGGGCTGAG
ATCACCGTGA CCCCGAGCGT CAAAGGGCTG GCGACGATTC ACGATAAGGA CATCCTGATC
TTTTGTGTGA GCCAGCTGAT GGCGGCGCTC AATGCGGGCC GGCAGGTGAG CCGGGTGCTG
CATCTCACGG CCCATGATCT CTTGGTGGCC TGCAACCGCG AAACCTCGGG CGATGCCTAT
CGCCGCCTGC GCGAGTCCTT TGAGCGCCTC GCGGGCACGC GGATCACTAC CAATATCACC
ACCGGCGGGC AGGAGATCAC TACCGGTTTT GGTCTTATCG AGAGCTGGGA GATCGTGCGC
AAGGCCCGGG GCGGGCGTAT GGTCTCGGTG GCGGTGACGC TGTCGGACTG GCTCTATCGG
GCGGTGCTGT CAAAATCGGT GCTGACCTTG AGCCGCGATT ATTTCCGGCT GAGGAAACCC
TTGGAGCGGC GCATCTACGA GCTTGCGCGC AAACACTGCG GCCGTCAGGA CAGCTGGCAG
ATCTCGGTTG AGACCCTCCT GAAGAAATCC GGCTCCGCCA GCCCGCGTCG GGTCTTTCGC
AAGATGGTCC GCGATATGAT CGAAAGCCAG CCTCTGCCCG ATTACGAGAT GGCAGAGCTA
GAAGGCGACA TCATCCGCTT CAGCCAGAAG GCCGCCGTGG TCGATGTGCC GCCGCCGGTG
ATTTCAGAGG CGGCCCGCGA CGAGGCGCGC CGGTTGATGC CGGGGGTGGA TGTGCATGCG
TTGGAGGCCG ACTGGCGCGC CACCTGGGCC CGCACCGGCG CCCCCCGCCT GCGCAAACCC
GACGCGGCCT TTGTGGGCTG GGTGCGAAAG CGGATGAACG ACTGA
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| Protein sequence | MTSALSEAGG YPPEGQGAYF LCDIFDAMPK NDLASMEHPL FSLSTRPDRR ILNYEHNGAE
ITVTPSVKGL ATIHDKDILI FCVSQLMAAL NAGRQVSRVL HLTAHDLLVA CNRETSGDAY
RRLRESFERL AGTRITTNIT TGGQEITTGF GLIESWEIVR KARGGRMVSV AVTLSDWLYR
AVLSKSVLTL SRDYFRLRKP LERRIYELAR KHCGRQDSWQ ISVETLLKKS GSASPRRVFR
KMVRDMIESQ PLPDYEMAEL EGDIIRFSQK AAVVDVPPPV ISEAARDEAR RLMPGVDVHA
LEADWRATWA RTGAPRLRKP DAAFVGWVRK RMND
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