Gene Dgeo_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2290 
Symbol 
ID4059239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2411309 
End bp2412037 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID641231340 
ProductHhH-GPD 
Protein accessionYP_605753 
Protein GI94986389 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGAAA CACCCGCGCT GAATGTGGCC CGCCCTGCTC CGGAGCGGGC CGCACTGCTC 
CGGTGGATAT TCGCGCGCCT GCGGGCCGAG TACGGCGAGA AGCAGCTCCT TCCCCGCCGC
GAGGCGATGC ACGAACTCAT CAGCACCATC CTCTCGCAGC GCACCACCCA GCAGGACGAG
GAACTCGCCT ATCAGGCATT GCGGCAACTA GGCGACTGGG ACGCAATCAT CGCCGCACCC
ACCGAGGCGG TCGCCCACGC GATCCGGCGC AGCAACTACC CGGAGAGCAA GGCGCCGCGG
ATCCAGGCCA CCCTGCGCGC CATTCGTGAC GAGCGGGGCA GCTACGACCT CGACTTTCTG
GCGGAGCTGC CGGTGAAGGA CGCGCTGAAG TGGCTCACCG CCCTGCCGGG CGTGGGGATC
AAGACGGCCT CGCTGGTGCT GCTTTTCAAC TATGCTCGCC CGGTTTTCCC GGTGGATACC
CACGTCCACC GCGTCACCAC GCGCGTCGGC GTGATTGGGC GGATGGGCGA GCAGGCAGCG
CACCGCGCGC TGCTGCAGCT GCTTCCCCCC GACCCACCCT TCTTGTTCGA ACTGCACCTC
AACCTGCTGC GGCACGGGCA GAAGGTGTGT ACCTGGGTGC GGCCGAAGTG CCCGGTCTGC
GTGCTGCGCG CACGCTGCGA CGCGCACGCG ATCTACGGAA ATAACGTGCC GAGTTTCGGA
GAGAAGTAA
 
Protein sequence
MNETPALNVA RPAPERAALL RWIFARLRAE YGEKQLLPRR EAMHELISTI LSQRTTQQDE 
ELAYQALRQL GDWDAIIAAP TEAVAHAIRR SNYPESKAPR IQATLRAIRD ERGSYDLDFL
AELPVKDALK WLTALPGVGI KTASLVLLFN YARPVFPVDT HVHRVTTRVG VIGRMGEQAA
HRALLQLLPP DPPFLFELHL NLLRHGQKVC TWVRPKCPVC VLRARCDAHA IYGNNVPSFG
EK