| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2194 |
|---|
| Symbol | |
|---|
| ID | 4056869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 2314038 |
|---|
| End bp | 2314772 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641231237 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_605657 |
|---|
| Protein GI | 94986293 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00428385 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.442442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGTC ACAGCAAATG GGCGCAGATC AAGCGCAAGA AGGGTGCGAA CGACAAGAAG
CGGAGTGCGA TCTACTCCAA ACACATCCGT GCGATTCAGG CAGCCGTCAG GAGCGGCGGA
AGCGGTGACC CGGCGGCAAA CCTCGCCCTG AAAAATGCCA TCGCGGCGGC TAAGGCGGAC
ACGGTCCCTG CTGACAACAT CGAGAACGCG ATCAAGCGCG CGGTGGGGGC CGCCGAAGGC
GCGGCTGACT ACAAGGAAGT CACCTACGAG GGCTACGGCC CCGGCGGCAC CGCGATCTTT
ATCGAGGCGC TGACCGACAA TGTCAACCGT ACCGTGGCCG ATATCCGCGC CGTCTTCAAC
AAACGCGGCG GCTCGCTGGG CAACAGCGGC TCAGTTGCCT GGCAATTTGA GAAAAAGGGC
GTGATTCTGC TCTCCGACAC CTCCGAGGCA GCGCAGGAGG TCGCCATTGA GAACGGCGCG
GAAGATATTC AAGAATCCGT AGACGGCTTG GAAATCAGCA CGGCGCCCAA TGACCTGTAC
GCGGTGCAAG ACGCCCTCAG CGCGGCGGGC TTCAAGCCCG AAAGCGGCCA GATCACCATG
ATCCCCAGCA ACACCGTCGC TGTGAACGGC GACGACGCCC GCAAGCTGAT GGCACTGGTG
GACGCTCTGG AAGACCTCGA CGACGTGCAG AACGTGTACA CCAACGCGGA TTTGCCGGAA
GAAGTCGAAG CGTAA
|
|---|
| Protein sequence | MAGHSKWAQI KRKKGANDKK RSAIYSKHIR AIQAAVRSGG SGDPAANLAL KNAIAAAKAD
TVPADNIENA IKRAVGAAEG AADYKEVTYE GYGPGGTAIF IEALTDNVNR TVADIRAVFN
KRGGSLGNSG SVAWQFEKKG VILLSDTSEA AQEVAIENGA EDIQESVDGL EISTAPNDLY
AVQDALSAAG FKPESGQITM IPSNTVAVNG DDARKLMALV DALEDLDDVQ NVYTNADLPE
EVEA
|
|---|
| |