Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1864 |
Symbol | rplB |
ID | 4057594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1963077 |
End bp | 1963910 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641230892 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_605328 |
Protein GI | 94985964 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0213539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGTCA AGAAATACCG TCCCTATACT CCGTCGCGCC GTCAAATGAC GACGGCGGAC TTCAGCGGCC TGACCAAGAA GCGCCCAGAA AAGGCGCTCA CCGTCCCGCT GCCCAAGACC GGTGGCCGCA ACAACCATGG CCGCATCACC AGCCGCTTCA TCGGCGGGGG TCACAAGCGT CTCTACCGCA TCATTGACTT CAAGCGCCGT GACAAGGCGA ACGTGCCGGC CAAGGTTGCT GCGATCGAGT ATGACCCCAA TCGCAGCGCT CGCATCGCCC TGCTGCATTA CGTCGACGGC GAGAAGCGCT ACATCCTGGC ACCCGAGGGC CTGACTGTGG GCCAGACGGT GAACGCGGGG CCGGAAGCCG AACCCAAGCT CGGCAACGCG CTGCCCCTGC GTTTTGTGCC GGTCGGTGCG GTGGTGCATG CTGTGGAACT CGTGCCCGGC AAGGGCGCGC AGCTTGCTCG CAGCGCCGGT ACCTCCATTC AGGTGCAGGG CAAGGAACGC GACTACGTAA TTCTCCGCCT CCCCAGTGGC GAACTGCGCC GTATCCACAG CGAGTGCTAC GCCACCATTG GCACTGTCGG CAACGCCGAG CACAAGAATA TCGTTCTCGG CAAGGCTGGT CGTAGTCGCT GGCTCGGCCG GAAGCCGCAC CAGCGTGGCA GCGCCATGAA CCCGGTGGAT CACCCACACG GTGGTGGTGA AGGCCGCACC GGTGCAGGCC GCGTGCCCGT CAGCCCCTGG GGTCAGCCTG CGAAGGGCCT CAAGACCCGT AAGAAGCGCA AGATTTCCGA CCGGTTCATC ATCACCCGCC GCGGTGGGAA GTAA
|
Protein sequence | MAVKKYRPYT PSRRQMTTAD FSGLTKKRPE KALTVPLPKT GGRNNHGRIT SRFIGGGHKR LYRIIDFKRR DKANVPAKVA AIEYDPNRSA RIALLHYVDG EKRYILAPEG LTVGQTVNAG PEAEPKLGNA LPLRFVPVGA VVHAVELVPG KGAQLARSAG TSIQVQGKER DYVILRLPSG ELRRIHSECY ATIGTVGNAE HKNIVLGKAG RSRWLGRKPH QRGSAMNPVD HPHGGGEGRT GAGRVPVSPW GQPAKGLKTR KKRKISDRFI ITRRGGK
|
| |