| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1458 |
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| Symbol | |
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| ID | 4058838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1546136 |
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| End bp | 1547137 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641230476 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_604922 |
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| Protein GI | 94985558 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.568664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0894322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGT ACCGCATCTG CTTGATTGAA GGGGACGGCA TCGGCCACGA GGTCATCCCC
GCCGCCCGCC GCGTGCTCGA AGCTTCCGGC CTGGACGCCG AGTTTGTGTC TGCGGAGGCC
GGTTACGAAT ACTTTCTCGA ACACGGCACC AGCGTGCCGC AGGCCACCTA CGAGGCCATC
GAGAGCACCG ACGCCACCCT CTTTGGCGCA GCAACCAGCC CCAGCGGCGA AAAACCCGCC
GGGTTCTTCG GCGCGATCCG TCACCTGCGC CGCAAGTACG ACCTGTATGC CAACGTGCGC
CCCACCCGCA CCCGGCCGGT CCCTGGCGCT TATGAGAACG TGGACCTGGT GATTGTCCGC
GAGAACACTC AGGGCCTCTA TGTCGAGCAG GAGCGCCGTT ACGGCGACAC GGCCATCGCG
GATACCGTGA TCACCAAAGA CGCCAGCGCC CGCATCGGCC GCTTTGCAGC AGACCTCGCC
ATGAAGCGCC GCAAGAAGCT GACAGTTGTG CACAAGAGCA ACGTGCTGCC CGTCACGCAA
GGCCTTTTTA TGAACACGGT GTTGGACGAG GCCCAGGCCT TTGAGGAGCT GAACGTGGGC
ACCATGATCG TGGACAATGC CGCCATGCAA CTGGTCCGCA ACCCCACCCA GTTCGACGTG
ATGGTGATGA CGAACATGTT CGGGGACATC CTCTCGGACC TGGCGGCAGG CTTGGTGGGT
GGCCTGGGGA TCGCGGCAAG CGGCAATGTC GGGGACCGCT TCGGCATCTT CGAGAGTGTC
CACGGCAGCG CCCCTGATAT CGCCGGACAG GGCATCAGCA ACCCCACGGC GACCATTCTG
GCTGCCGTGC TGATGCTCGA TCACCTCGGC GCACACGACG TGGCCCGCCG GATCGACAAC
GCGGTGAACA CCGTGCTGGC CGAAGGCCCG CGCACCCGTG ACCTGGGCGG CACTGCGGGC
ACCCAGGAGT TCACCGACGC GGTGATCGCG CAGCTGAAGT AA
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| Protein sequence | MAKYRICLIE GDGIGHEVIP AARRVLEASG LDAEFVSAEA GYEYFLEHGT SVPQATYEAI
ESTDATLFGA ATSPSGEKPA GFFGAIRHLR RKYDLYANVR PTRTRPVPGA YENVDLVIVR
ENTQGLYVEQ ERRYGDTAIA DTVITKDASA RIGRFAADLA MKRRKKLTVV HKSNVLPVTQ
GLFMNTVLDE AQAFEELNVG TMIVDNAAMQ LVRNPTQFDV MVMTNMFGDI LSDLAAGLVG
GLGIAASGNV GDRFGIFESV HGSAPDIAGQ GISNPTATIL AAVLMLDHLG AHDVARRIDN
AVNTVLAEGP RTRDLGGTAG TQEFTDAVIA QLK
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