Gene Dgeo_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1329 
Symbol 
ID4056962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1413461 
End bp1413805 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content66% 
IMG OID641230343 
Producthistidine triad (HIT) protein 
Protein accessionYP_604794 
Protein GI94985430 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.902977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC CCGATCCCAC CCTCTTCGAG CGCATCATCG CCCGCGAGCT TCCCGCCGAC 
GTGGTGTATG AGGACGAAAA CTACATCGCC ATCCGCGACA TCGCGCCCAA GGCTCCGATT
CACCTGCTGG TGATTCCCAA AAAGGTGACG GCCCGCGTGG ACGAGATCAC GGACCCCGCC
GAGATGGGCG AGCTGTGGCT GACGGCCACG AAGGTGGCGC GGCAGCACGC CCAGGACTAC
CGGATGGTCG TGAACTGCGG GCCGGGCGGT GGGCAGATGG TCTTCCACAC CCACATCCAC
ATCCTGGCCG GGTGGGAAGG TGGCCCCGCG AGCGACGTCC TGTGA
 
Protein sequence
MTNPDPTLFE RIIARELPAD VVYEDENYIA IRDIAPKAPI HLLVIPKKVT ARVDEITDPA 
EMGELWLTAT KVARQHAQDY RMVVNCGPGG GQMVFHTHIH ILAGWEGGPA SDVL