| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1273 |
|---|
| Symbol | |
|---|
| ID | 4058771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 1353916 |
|---|
| End bp | 1354383 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641230287 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_604738 |
|---|
| Protein GI | 94985374 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.263066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.458377 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTGACC TCATCGCCCG CAAGACGCCG CCGCCCGGCC TGCGCCCCGC CCTGCGGGCT
GCCCTGACGT CGGCGATGCG CCATTTCGGC GTAGAGGACC GCGAGGTGAC CGTGGTCCTG
GTGGGCGACC GCACCATCCG CGCGCTGAAG CGGGAACACT GGGGTGAAGA CGCGCCGACC
GACGTGCTGA GTTTTCCCAC CTGGGAGCCG GGCGATCCCT TTATGCCCCC GCACCTGGGG
GACATCATCA TCAGCCTGGA CACGGCGGGG CGGCAGGCGG CGGCGCGCGG GCATTCCCTG
ACGCGCGAGG TGGCACTGCT CGCCAGCCAC GGCCTCACCC ATCTGGTTGG GCATGATCAC
CCCCACGCCG AGGGGCTAGG CTTCGAGGAA GGGGCAACCG GGCCGGAATG GCAGGTTTTC
CACGACGCTT GGGAAGCCGC ACGCTTGGCC CTGCCGCCAG AAGCATGA
|
|---|
| Protein sequence | MIDLIARKTP PPGLRPALRA ALTSAMRHFG VEDREVTVVL VGDRTIRALK REHWGEDAPT
DVLSFPTWEP GDPFMPPHLG DIIISLDTAG RQAAARGHSL TREVALLASH GLTHLVGHDH
PHAEGLGFEE GATGPEWQVF HDAWEAARLA LPPEA
|
|---|
| |