| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1257 |
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| Symbol | |
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| ID | 4058755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1335183 |
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| End bp | 1336352 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641230271 |
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| Product | homocitrate synthase |
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| Protein accession | YP_604722 |
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| Protein GI | 94985358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02146] homocitrate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.943994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.64456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAG ATTCCTCCAC GCCCCTGATC CCGGCCCGTT CGTGGGCCAT CATCGACTCG
ACGCTGCGGG AGGGCGAGCA GTTCGCACGC GGGAACTTCA AAACGGGGGA CAAGATCGAG
ATCGCCCGGC TGCTGGACGC CTTTGGGGCC GAATTTCTGG AAGTGACCAC ACCGATGGTG
GGCGCGCAGA CGCAGGCCGA TATCCGGCGC CTGACCTCGC TCGGTCTGAA TGCCAAGATC
CTCACCCATG TGCGCTGCCA CCTGGAGGAC GTGCAGCGGG CGGTGGATTT GGGCGTGGAC
GGGCTGGACC TGCTGTTTGG CACCAGCTCC TTCCTGCGTG AATTCAGCCA CGGCAAGAGC
ATCGCGCAGA TCATCGACAC GGCCTCAGAG GTGATCGGCT GGATCAAGCA AAACCACCCC
GATCTCGAGA TCCGCTTCAG CGCAGAAGAC ACCTTCCGTT CGGAGGAGGC GGACCTGATG
GCGGTGTACC GCGCCGTCTC CGACCTGGGC GTTCACCGCG TCGGGCTGGC GGACACGGTG
GGGGTGGCGA CTCCCCGGCA GGTCTACACG CTGGTGCGCG AGGTCCGCAA AGTTATCCAC
GCTGAATGCG GCATCGAGTT CCACGGTCAC AACGACACCG GCTGCGCGGT CTCCAACGCC
TATGAGGCGA TTGAGGCGGG CGCCACCCAC ATTGACACGA CCATCTTGGG GATCGGGGAG
CGCAACGGCA TCACGCCGCT GGGGGGCTTC CTGGCGCGGA TGTTTACCTT CGACCCTCAG
GGCTTGATCG ACAAATACAA CCTCGAGCTG CTGCCCGAAC TCGACCGCCT GATCGCGCGG
CTGGTGGATC TGCCGATTCC CTGGAACAAC TACCTGACCG GCGAATTCGC CTACAACCAC
AAGGCGGGAA TGCACCTCAA GGCGATCTAC CTCAACCCCG GTGCCTATGA GGCGATTCCG
CCCAGCGTCT TCGGCGTGGG CCGCCGCATC CAGGCCGCGA GCAAAGTCAC AGGCAAACAT
GCCATCGCCC ACAAGGCCCG TGAGCTGGGA CTGCACTACG GCGAGGACGC CCTGCGCCGC
GTGACCGACC ACATCAAAGC GCTGGCTGAG GAGGGCGAGC TGGACGACGC GCATCTGGAG
CAAGTGCTGC GCGAGTGGGT GCGGGCATAG
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| Protein sequence | MTPDSSTPLI PARSWAIIDS TLREGEQFAR GNFKTGDKIE IARLLDAFGA EFLEVTTPMV
GAQTQADIRR LTSLGLNAKI LTHVRCHLED VQRAVDLGVD GLDLLFGTSS FLREFSHGKS
IAQIIDTASE VIGWIKQNHP DLEIRFSAED TFRSEEADLM AVYRAVSDLG VHRVGLADTV
GVATPRQVYT LVREVRKVIH AECGIEFHGH NDTGCAVSNA YEAIEAGATH IDTTILGIGE
RNGITPLGGF LARMFTFDPQ GLIDKYNLEL LPELDRLIAR LVDLPIPWNN YLTGEFAYNH
KAGMHLKAIY LNPGAYEAIP PSVFGVGRRI QAASKVTGKH AIAHKARELG LHYGEDALRR
VTDHIKALAE EGELDDAHLE QVLREWVRA
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