Gene Dgeo_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1229 
Symbol 
ID4057738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1308319 
End bp1309347 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content70% 
IMG OID641230243 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_604694 
Protein GI94985330 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.157055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGT CACGCCCAAG TTTGCCCGAG CCTCAACGTC CCGAACACTT TCGTGCCCTG 
CGCGCCGTCA AGGACGAGAC CGGCGTGCGG CCTGAGTTTC AGACCCTCAC TCTTGCCGAT
CTGCCGGAAG GCGAGGTGCT GGTGCGTGTC ACCCACTCCA GCCTGAACTA CAAAGACGGC
CTGGCGGTCG CGGGCAGACC CGGTGTGCTT AAGGCTTACC CGATGACGCC CGGCATTGAC
CTGGCGGGGA CCGTTGTGGA GGACCAGACC GGGACGTACC GGCCGGGCGA CGCAGTCCTG
CTGACCGGCT GGGGCATTGG CGAGCGTCAG GACGGGGGAT ACGCCGAGTA CGCGCGGGTG
AAGGCAGCCT GGTTGGTGCC GCTCCCGGAA GGAACCGACG CGCAGTGGGC CATGAGCGTG
GGTACGGCGG GCTTCACGGC GATGCTGGCG GTGATGGCCC TGGAGGAACA CGGCGTCACC
CCCGGGAGCG GCGAGGTGCT GGTGACGGGT GCGGCGGGCG GTGTGGGCAG CACTGCCGTC
GCTCTGCTTG CCGCCGCCGG CCATTCCGTC ACCGCCAGCA CGGGCCGCCG CGAGGAGGAG
GACTATCTGC GCTCCCTCGG TGCCGCCAAC ATCATTGGCC GTGAGGAATT GCCCGCGCTG
AAGCGGCCGC TGGAAAAGGA ACGCTGGGCG GGCGTGGTCG ACAGTGTGGG GGGGGATACC
TTGGCCGGTG CGCTCGCGAG CACCCGTACC CACGGCGCGG TTGCGGCCTG CGGGCTGGCC
GGTGGCAGCG GGCTCAACAC CACGGTTTTT CCCTTCATCC TGCGGGGCGT GAACTTGCTT
GGGATCGACT CGGTGACCTG CCCCACCGAG CGGCGCCGCG CGGCCTGGGC AAGGCTAGCG
CGCGACCTGC CCGCCGCCAA ACTCGCAGGT GTGACGCAGC TTCGCCCCCT CAGCGACGTA
CCCGCGCTCG CGCAGGAGAT TCTGGCGGGG CGGGTGCGGG GCCGGACCGT GATCGACGTG
ACCCGCTGA
 
Protein sequence
MAQSRPSLPE PQRPEHFRAL RAVKDETGVR PEFQTLTLAD LPEGEVLVRV THSSLNYKDG 
LAVAGRPGVL KAYPMTPGID LAGTVVEDQT GTYRPGDAVL LTGWGIGERQ DGGYAEYARV
KAAWLVPLPE GTDAQWAMSV GTAGFTAMLA VMALEEHGVT PGSGEVLVTG AAGGVGSTAV
ALLAAAGHSV TASTGRREEE DYLRSLGAAN IIGREELPAL KRPLEKERWA GVVDSVGGDT
LAGALASTRT HGAVAACGLA GGSGLNTTVF PFILRGVNLL GIDSVTCPTE RRRAAWARLA
RDLPAAKLAG VTQLRPLSDV PALAQEILAG RVRGRTVIDV TR