| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1225 |
|---|
| Symbol | |
|---|
| ID | 4057735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 1305806 |
|---|
| End bp | 1306252 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641230240 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_604691 |
|---|
| Protein GI | 94985327 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0259707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGG GGAGTGCTTC CACGGGCAAA CTCAGCACGC GCACGGCGAT GGCGGTTCAT
ATTCTCACGC TGGTGGGGGC AAATCCCGAT GTGGCGCATT CGAGCGAGTG GTTGGCAGGC
AGCCTAGGCG TTCACCCCGT GATGGTGCGG CAGGTCACGT CCCGCCTGCG CGCCGCCGGA
CTGGTGGAGA CGCGCCGGGG CAAGGCGGGG TTGCGTCTAA CCCGTCCGGC GTCTGCCATG
ACGCTGCTCG ATGTGTACCG CGCCGTCGAG GACGGGGACG CCCTGCTCGC CCTGCACGCC
CGCCCCAACC CGTCTTGCCC AGTCGGCTCC GGCATTCAGG CCGTGCTGGA GGACGTGTTC
GAGGAGGCGC GGACGGCCTT TGAGCGCTCC CTCGCCGCCC GCACCGTCGC AGACGTGATG
GCCCGGGTGC TCTCCCGTGC TGGGTGA
|
|---|
| Protein sequence | MTTGSASTGK LSTRTAMAVH ILTLVGANPD VAHSSEWLAG SLGVHPVMVR QVTSRLRAAG
LVETRRGKAG LRLTRPASAM TLLDVYRAVE DGDALLALHA RPNPSCPVGS GIQAVLEDVF
EEARTAFERS LAARTVADVM ARVLSRAG
|
|---|
| |