| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1169 |
|---|
| Symbol | |
|---|
| ID | 4058785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 1240972 |
|---|
| End bp | 1241892 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641230184 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_604635 |
|---|
| Protein GI | 94985271 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.241092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAG GAACCATCCG CGAAAGGCCG TCAGCGGGCA ACACCGCCCT CAACCTCCGG
GTGCGGAAGC GGCGCAGGGA GCGGGTGGCG AACTTCTTCG CCTACCTCGT GCTCATCGCC
ATTGCCCTGA TCATGCTCTA TCCCTTCTAC TGGACGGTGA TCACCAGTCT GGAGCCGACC
GGGAACATCT ACGAGGCAAA GCTGCTGCCC CGCGGCCTCA GCCTGAAGAA TTACGCGGAG
GTGCTCACCG GGACGACGGT GCCGTTTTGG CGACTGATTC TCAACAGCCT GATCATCTGC
ACGGCGGGTG TGTCCCTCAC CGTCACGCTC GCGGCGCTGG CCGCCTATCC ACTGGCCAAG
ATGCGCTTTC CGGGGCGCGA CCTCATCTTC TACGCGATCC TGGTTTTGAT GGTGCTGCCG
AACGAGGCGG GCCTGATCGT CAACTACATC ACGACCATCA AGCTGGGGCT GTTGCAACAG
ACCAACCCGG TCTTGGACGC CATCCGGCAG TACGCGGCGG TGGTGCTGCC GGGCGTTGCC
AGCATCGTGG GGTTGTTTCT GCTGCGGCAG GCGTATCTGG GGGTGCCGCT TGAGCTGATT
GAGGCTGCGC GCATCGACGG AGCAAAGGAA CTGACCATTT GGCGGCGCAT CATGCTGCCG
CTGGCGCTGC CGACCATCGT GGCCTTTTCC ATTCTGGAGT TTGTGGCGTA CTGGAATTCC
TTCCTGTGGG CACGCATCAT GCTGCCCGAT AAGAACCTGA TGCCGCTCTC GGCGGGACTC
CTCGAACTCT CGGGCACCTT CAGCACCAAC TCGCGCGCGG TGATGGCGGG GGCAGTGATC
ACGGTGCTGC CCATCCTGGT GATCTTCGCC TTCGGACAGC GATACTTCAT GAAGGGGATC
GAGGGGGCGG TGAAGGGGTG A
|
|---|
| Protein sequence | MLKGTIRERP SAGNTALNLR VRKRRRERVA NFFAYLVLIA IALIMLYPFY WTVITSLEPT
GNIYEAKLLP RGLSLKNYAE VLTGTTVPFW RLILNSLIIC TAGVSLTVTL AALAAYPLAK
MRFPGRDLIF YAILVLMVLP NEAGLIVNYI TTIKLGLLQQ TNPVLDAIRQ YAAVVLPGVA
SIVGLFLLRQ AYLGVPLELI EAARIDGAKE LTIWRRIMLP LALPTIVAFS ILEFVAYWNS
FLWARIMLPD KNLMPLSAGL LELSGTFSTN SRAVMAGAVI TVLPILVIFA FGQRYFMKGI
EGAVKG
|
|---|
| |