| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1103 |
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| Symbol | rho |
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| ID | 4058973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1173619 |
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| End bp | 1174896 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641230119 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_604570 |
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| Protein GI | 94985206 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0575951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00481193 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGAAC CCCAGACCGT TCCCCTTCCC TTTCACGAAC TCCAGCAGAA GATCCTGCCG
GAGCTGCATC TGATCGCCGC TCAGAACGGC ATCGAGAACT ACCGCAAGCT GAAAAAGGAG
GCTTTGGCCC TCGCCATTCT GGAGCGGCAG GCGGAAGCCG AGGGGCAGGT GCTGGCGCGC
GGCTTCCTCG ACATCAGCCC CGACGGCTAC GGATTTCTCC AGTCAGACCT CCTGGACCCC
GCCTCGAGAA GCGTGCTGGT CACGGCTGGG GTGATCAAGC AGTTTCACCT GCGCACCGGC
GACGAGGTGA TTGGCCGCGC GCGTCGCCCA CGCGAGAACG AGCGCTACGG CACGCTGGTG
CAGGTGGAGG CAGTCAATGG CCTGGATCCG GAGACAGCGC GCAAGCGTCC GCGGTTTGAC
GACCTGACGC CCACCTTTCC AGACCGGCAA TTGGTGCTGG AAGACCCGCA GATGGATGAC
GGCCTCTCGC TGCGGGTGGT GGACCTGCTC GTGCCTATCG GGCGCGGGCA GCGGGCGCTG
ATTGTCGCGC CGCCCAAAGC CGGCAAGACG ACCCTGCTCA AAAAGATTGC CAACTCGATC
GTCAAGAACT ATCCCGACGT GACGGTGATG GTGCTGCTGG TCGACGAACG CCCCGAGGAG
GTCACCGACT TTCGCGAGAG CGTGCAGGGC GCGCAGGTGA TCGCCTCCAC CTTCGACGAG
CCGCCGCAGC ACCACGTGCG CGTGGCAGAG TTTGTGCATG AACGTGCCCG GCGCATCGTG
GAGGAAGGCG GCCACGTGGT GATTCTGCTC GACTCGATCA CCCGCTTGGC GCGGGCGAAC
AACCTGGTGA CGCCGCCCAC GGGCCGCACC CTCTCGGGGG GGCTGGACTC CAATGCGCTG
CACTGGCCCA AGCGCTTCCT GGGTGCGGCC CGCAACATCC GCGAGGGGGG TTCGCTCACC
ATCTTGGCGA CCGCGCTGGT CGAGACCGGC TCGCGCATGG ACGACGTGAT CTTTGAGGAA
TTCAAGGGCA CCGGCAATGC CGAACTGGTG CTTTCGCGCC GCCTGGAGGA GCGCCGCATC
TTCCCTGCGC TCGACATCCT GAAGTCCGGC ACCCGCCGCG AGGAACTGCT GCTGCAGCCG
GAAGTCCTGA AGAAGATGTG GCTCCTGCGC AAGGTGATCA GCGATATGGA TCCCGCCGAC
GCGATGGAGA TGCTGCTCTC GCGCATGGGC AAGACGCGCA ACAACGTCGA ATTCCTGCAG
TCGTTGGCGG GCGGCTGA
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| Protein sequence | MTEPQTVPLP FHELQQKILP ELHLIAAQNG IENYRKLKKE ALALAILERQ AEAEGQVLAR
GFLDISPDGY GFLQSDLLDP ASRSVLVTAG VIKQFHLRTG DEVIGRARRP RENERYGTLV
QVEAVNGLDP ETARKRPRFD DLTPTFPDRQ LVLEDPQMDD GLSLRVVDLL VPIGRGQRAL
IVAPPKAGKT TLLKKIANSI VKNYPDVTVM VLLVDERPEE VTDFRESVQG AQVIASTFDE
PPQHHVRVAE FVHERARRIV EEGGHVVILL DSITRLARAN NLVTPPTGRT LSGGLDSNAL
HWPKRFLGAA RNIREGGSLT ILATALVETG SRMDDVIFEE FKGTGNAELV LSRRLEERRI
FPALDILKSG TRREELLLQP EVLKKMWLLR KVISDMDPAD AMEMLLSRMG KTRNNVEFLQ
SLAGG
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