| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0981 |
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| Symbol | |
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| ID | 4058678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1052368 |
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| End bp | 1054326 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641229999 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_604450 |
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| Protein GI | 94985086 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.37129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.433168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC CGTTGCGGGC GTCCTCACCC GCTACACTCG CCCTCATGAG CTCCCTGCCT
CTGCCGCTGG ACCACGGGCA CCTTCAGAAG CTGGTGACTG CCGATCTCGT GCGCCCGGAC
CACCTGCTCG GAGCACATCC CGTCACCGAG AATGGCGTGG AGGGCGTGCG CTTCGCCGTG
TGGGCGCCGC GTGCTCAGCA TGTCAGCGTC GTCGGGGACT TCAACGGTTG GAACGGGTTT
GATCACCCGA TGCAGCGCCT GGACTTCGGC TTTTGGGGCG CCTTTGTGCC CTCGGCGCGG
CCCGGGCAGC GCTACAAGTT CCGCGTCACC GGCGCTGACG GGCGCACCGT GGACAAGATG
GACCCCTACG GCGCCTTTAC CGAGGTTCGC CCCAACACCG CCAGCATCAT CTGGCCGCTC
GCCTTTGAGT GGACAGACGA CGCTTGGATG CAAAAGCGGA CGCCGGGTTT TGACCGGCCC
ATCAGCATCT ACGAAGTCCA TGTCGGTTCC TGGGCTCGGC GTGACGACGG CTGGTTCCTG
AACTACCGCG AGCTGGCGCA CCGCCTGGCC GACTACGTCA CCTTTATGGG CTACACCCAT
GTTGAGCTGC TGGGTGTGAT GGAGCATCCC TTCGACGGCT CTTGGGGTTA CCAGGTCACC
GGCTACTATG CGCCGACCAG TCGCCTGGGG GCCCCCGAGG ACTTCGCCTA CCTGGTCAAC
CACCTGCACG AGCGGGGCAT CGGCGTGATT GTGGACTGGG TGCCGGGGCA CTTCCCGACC
GACGAGGCGG GCCTCGCCCA CTTTGACGGC GCGCCGCTCT ACGAGTATTC GGACCCGCGC
AAGGGCTACC ACTACGACTG GAACACCTAC ATCTTCGACT ATGGCCGCAA CGAGGTCATG
ATGTTTCTGA TCGGCTCGGC CCTGAAATGG CTCCAGGATT TCCACGTGGA CGGCTTGCGG
GTGGACGCGG TGGCCTCGAT GCTGTACCTC GATTTCTCGC GCACCGAATG GGTCCCCAAC
ATTCACGGCG GGCGTGAGAA TCTGGAAGCG ATCGCCTTTC TCAAGCGGCT CAACGAGGTC
GTGCATCACA TGGCACCGGG CTGCATGATG ATCGCGGAGG AAAGCACCGC CTTCCCCGGT
GTCACGTCCC CGACGCCCTT TGGTTTGGGT TTTGATTACA AGTGGGCGAT GGGGTGGATG
AACGACACCC TGTATTACTT TGAACAGGAT CCTCTGTGGC GCAAATACCA CCACCACAAG
CTGACCTTCT TCAATGTGTA CCGCACCGGC GAGAATTACA TCCTGGCGAT CAGTCATGAC
GAGGTGGTCC ACCTCAAGAA GGCGATGGTG TCGAAGATGC CCGGCGACTG GTACATGCAG
CGGGCGGGGT ACCGCGCTTT CCTGGCCATG ATGTGGACCA CGCCCGGCAA GAAGCTGCTG
TTTATGGGTC AGGAATTTGC GCAGGGCACG GAGTGGAACC ACGACGAGGC GCTGCCCTGG
GACGTGACCG ACCTCCCCGA ACACCGCGGG GTCATGAATC TGGTGCGGCG CCTGAATGGC
CTTTACCGCG AGCGGCCCGA CCTGCACATC GGCGACACCT GGGAGGAAGG CCAGCTGTGG
GTGAGCGCTG ACGATACCGA CAACAGCGTC TACGCCTATA TTCGCCGTGA TCCGCGGCCC
CAAGCGGAAG GTGGCGGCGC TTGGAGCCTC GCGGTCGCCA ACCTCACGCC CGTCTACCGC
GAGGGTTACC CCATCGGCGT GCCCCAGGGC GGCGAGTACC GCGTGCTGCT CTCCACCGAT
GACGGCGAGT ACGGCGGCTT CGGCACCCAG CAGCCTGACC TGACCGCCAA GGAGGAGGGT
TGGAACGGGC AGACGCACCA CCTGCGCCTG AACCTGCCGC CCATGAGCGT GCTGCTTCTG
GAACATGTGG GCGTGACGCC CCGCAGCGAG GACCGGTGA
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| Protein sequence | MLDPLRASSP ATLALMSSLP LPLDHGHLQK LVTADLVRPD HLLGAHPVTE NGVEGVRFAV
WAPRAQHVSV VGDFNGWNGF DHPMQRLDFG FWGAFVPSAR PGQRYKFRVT GADGRTVDKM
DPYGAFTEVR PNTASIIWPL AFEWTDDAWM QKRTPGFDRP ISIYEVHVGS WARRDDGWFL
NYRELAHRLA DYVTFMGYTH VELLGVMEHP FDGSWGYQVT GYYAPTSRLG APEDFAYLVN
HLHERGIGVI VDWVPGHFPT DEAGLAHFDG APLYEYSDPR KGYHYDWNTY IFDYGRNEVM
MFLIGSALKW LQDFHVDGLR VDAVASMLYL DFSRTEWVPN IHGGRENLEA IAFLKRLNEV
VHHMAPGCMM IAEESTAFPG VTSPTPFGLG FDYKWAMGWM NDTLYYFEQD PLWRKYHHHK
LTFFNVYRTG ENYILAISHD EVVHLKKAMV SKMPGDWYMQ RAGYRAFLAM MWTTPGKKLL
FMGQEFAQGT EWNHDEALPW DVTDLPEHRG VMNLVRRLNG LYRERPDLHI GDTWEEGQLW
VSADDTDNSV YAYIRRDPRP QAEGGGAWSL AVANLTPVYR EGYPIGVPQG GEYRVLLSTD
DGEYGGFGTQ QPDLTAKEEG WNGQTHHLRL NLPPMSVLLL EHVGVTPRSE DR
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