Gene Dgeo_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0910 
Symbol 
ID4059193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp971857 
End bp972393 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID641229930 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_604381 
Protein GI94985017 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.617047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTAA AGGAACTCTT CGACCGTGAC TGGCAGGAAC TTGAATCCGA GGGCGTTCTC 
TTTTCCACGC TGGAAAAGCT GGTGGCGTGG GGCCGCAGCA ACAGCCTCTG GCCTGCGACC
TTCGGGCTGG CCTGCTGCGC CATCGAGATG ATGAGCAGCA CGGACGGACG CAACGACCTC
AGCCGTTTTG GCTCCGAGGT GTTCCGCGCG TCGCCCCGAC AGGCGGACGT GATGATCGTG
GCGGGGCGGC TCTCCAAGAA GATGGCGCCG ATCATGCGCC GGGTCTACGA CCAGATGCCC
GACCCCAAGT GGGTGATCAG CATGGGAGCC TGCGCGAGTT CGGGTGGCAT GTTCAACAAC
TACGCCGTTG TGCAGAACGT AGACCACGTG GTTCCGGTGG ATGTGTTCGT GCCCGGCTGC
CCGCCCCGCC CTGAGGCCCT GATCTACGCC GTGATGCAGC TTCAGAAAAA GGTGCGCGGC
GAGGCCTACG ACGCGCGCGG CGAGCAGCTT CCAATGGTGG AGGCGTGGAC GCGATGA
 
Protein sequence
MALKELFDRD WQELESEGVL FSTLEKLVAW GRSNSLWPAT FGLACCAIEM MSSTDGRNDL 
SRFGSEVFRA SPRQADVMIV AGRLSKKMAP IMRRVYDQMP DPKWVISMGA CASSGGMFNN
YAVVQNVDHV VPVDVFVPGC PPRPEALIYA VMQLQKKVRG EAYDARGEQL PMVEAWTR