Gene Dgeo_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0842 
Symbol 
ID4057961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp901140 
End bp901928 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID641229862 
Producthypothetical protein 
Protein accessionYP_604313 
Protein GI94984949 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.213592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGACGG ATCCCGTCTG GGCTGCTACA GTCCCCTGCG TGCCCGGTCC TGACGTTTTG 
CTCTACGGCC TCCCCCTCGC CTTTCTCGCC GGATTTATCG ATGCGGTGGC GGGTGGCGGG
GGCACGATCA CGCTCCCGAC GTTGTTTTTC ATGGGCTTAT CCCCCGCGCA GACGGTCGCC
ACCAACAAGC TGCTCGCCAT CTTCGGCTCG GGCAGCGCCA CCCTGCAGTA TTGGCGCAAG
GGTCACGTGG AAAAGGCGCT GGTGCTGCGG CTGGTTCCGC TGGCACTGCT CGGAAGCGCG
CTGGGTGCCT ACCTGGTCCA TTTCGTCAAC CCGAATGCCT TCCGCACCTT GGTCGGCGTG
GTGATTCTGG GCGTGGGTGT GCTGGTGCTG GTGAACAAAC GTTTCGGGCT AGAGGACCAC
TACCCAGGCC TCACCGTTCG TACCCTGGCG CTCACGCTGC CCGGCGCCCT GATCATCGGG
ATGTACGACG GCTTTCTGGG TCCCGGCACC GGCACCTTTT TGATGTTCCT GTTCGCGCTG
GCGGGCTTCA ACCTGGTCCG CTCCAGCGGC AACGCCCGCA CCATCAACTT CGCCACCAAC
CTGGGTGCGT TCTTGTTCTT CCTGCTGGGC GGCCAGATGG TCTGGTGGAT CGGCCTGCCG
ATGGGCGCGG CCAACGCGCT GGGCGCTACC CTGGGTGCCC GGATGGCGAT GCTGCGTGGC
AGCGGCTTCG TGAAGGTGAT GTACGGGCTG ATCGTGGTGC TGGTGGCGGC GCGGCTGCTG
ACGCAGTAA
 
Protein sequence
MRTDPVWAAT VPCVPGPDVL LYGLPLAFLA GFIDAVAGGG GTITLPTLFF MGLSPAQTVA 
TNKLLAIFGS GSATLQYWRK GHVEKALVLR LVPLALLGSA LGAYLVHFVN PNAFRTLVGV
VILGVGVLVL VNKRFGLEDH YPGLTVRTLA LTLPGALIIG MYDGFLGPGT GTFLMFLFAL
AGFNLVRSSG NARTINFATN LGAFLFFLLG GQMVWWIGLP MGAANALGAT LGARMAMLRG
SGFVKVMYGL IVVLVAARLL TQ