Gene Dgeo_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0600 
Symbol 
ID4058050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp640964 
End bp641974 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID641229614 
Productketol-acid reductoisomerase 
Protein accessionYP_604071 
Protein GI94984707 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.716466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA CGATGTACTA CGACCGCGAC GTGAGCCTCT CACCCATCGA AGACAAGCTG 
ATCGCCATCA TCGGCTACGG TTCTCAAGCG CACGCGCACG CGCAAAACCT GCGCGACAGC
GGGTTGAACG TGGTGGTCGG CCTCCGCGAG GGCAGCCCCA GCCGTCCCAA GGCCGAGCAG
GCGGGCCTGC GCGTGACGAG CATCGAGGAC GCGACCCGGG AAGCGGACGT GATCATGCTG
CTGATCCCCG ACGAAACGCA GCCCAAGGTG TACGAGGAGA GCATCGCCCC GAACCTGACG
GCGGGCAAGG CCCTCGCCTT CGGGCACGGC TTCAACATCC ACTTTGGGCG CATCAAGCCA
CCGGCCGACG TGGATGTGTT CCTGGTGGCG CCCAAGGGGC CGGGCCACAT GCTGCGCCGC
GTGTACGTGG ACGGTGCCGG AATGCCCAGC ATCTTCGCGG TGGGGCAGGA CGCGAGCGGC
AATGCCCGCG ACCTCGCTCT CGCCTATGCG CGCGGCATCG GCGGCACCCG TGCGGGCGTG
CTGGAAACGA CCTTTAAGGA GGAGACAGAA ACGGACCTCT TCGGAGAGCA GTCCGTTCTC
TGCGGCGGCG TGACGCACCT GATCCAGGCG GGCTTTGAGA CGCTGGTGGA AGCCGGGTAC
CAGCCCGAGA TCGCCTACTT CGAGACGCTG CACGAGGTCA AGCTAATTGT GGACCTGATC
TACGAGAAGG GCTTCGAGGG GATGCGCCAC TCCATCTCCA ACACCGCCGA ATACGGCGAC
TATGTGACCG GGCCGCGCAT CATCACAGAC GAGACGAAAG CGACCATGAA GGACGTCCTG
AGCGATATCC AAAGCGGCAA GTTCGCACGT GACTTCATTC ATGAGGCCGA GAGCGGCTTC
CCCTTTATGA AAGAGCAGCG CCAGAAGATG CGCCACCACA CCCTAGAAGT GGTGGGCCGA
GAGTTGCGGA GCAAGATGCC CTTTATCAGC AAGCAGGAGC TGGAGGTTTA A
 
Protein sequence
MAATMYYDRD VSLSPIEDKL IAIIGYGSQA HAHAQNLRDS GLNVVVGLRE GSPSRPKAEQ 
AGLRVTSIED ATREADVIML LIPDETQPKV YEESIAPNLT AGKALAFGHG FNIHFGRIKP
PADVDVFLVA PKGPGHMLRR VYVDGAGMPS IFAVGQDASG NARDLALAYA RGIGGTRAGV
LETTFKEETE TDLFGEQSVL CGGVTHLIQA GFETLVEAGY QPEIAYFETL HEVKLIVDLI
YEKGFEGMRH SISNTAEYGD YVTGPRIITD ETKATMKDVL SDIQSGKFAR DFIHEAESGF
PFMKEQRQKM RHHTLEVVGR ELRSKMPFIS KQELEV