| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0256 |
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| Symbol | |
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| ID | 4058541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 246882 |
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| End bp | 247961 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641229258 |
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| Product | twitching motility protein |
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| Protein accession | YP_603728 |
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| Protein GI | 94984364 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCT TGCAGGCCTT GCTGGGAGTC ATGGTGAAGT CGGGAGCCAG CGATATTCAC
CTGCGGTCTG GGAGTGCACC CGCCGCACGG ATCAATGGAA ATATCGTCCG TTTTGGGGAA
GACCGGCTCT CGCCTGACCA CGTGGCTGGG TTTGCCCGCG AGATGATGAG CCGCCCGGGT
CTCTGGGAAG AGTTCATCAC GCGCCGCGAC GCCGACTTCG CGTATGGGGT TCCAGGTGTC
GCTCGGTTCC GCGTGAACGC CTACTACCAG CGCGGCACAG TCGGCCTGAT CATGCGCGTG
ATCGAAGAAA AACCCATTCC CAGCTTTGCG GAACTGGGCC TGCCCGTTGC GACCTTCGAG
GCGCTGGCCG CCCAGGAACG CGGCTTGGTG CTGGTGACCG GCCCCACCGG CTCGGGCAAG
ACGACCACCC TGGCTTCGAT CCTCGACCAC ATCAACGCCA CCCAGCCCGT CAACATCGTC
ACGCTGGAAG ACCCCATCGA GATCCTGCAC CGTGACAAGC AGGCCCTGGT GTCGCAGCGC
GAACTGGGCA CCGATACCCT CAGCTTCGCG GCGGGCCTGC GCGCGGCCAT GCGCCAGGAT
CCGGATGTGA TCCTGATCGG CGAGATGCGC GACAAGGAGA CGGTGGAGGC CGCCCTCTCT
GCCGCGCAGA CCGGACATCT GGTCTTCTCG ACCCTCCACA CCCTCGACGC CATCCGCACG
GTCAACCGCA TCATCGATTT CTTCGCGCCA CACGAACGCG ACCAGATTCG CCTTGCCCTC
TCTGAGAGCC TGGTCGGCGT GGTCAGTCAG CGGCTGCTGC CGCGCCAGGG CGGGGGTCGG
GTGCTGGGCA TGGAAATCTT GCTCGGCACG CCCACCGTCC GCGAGTGCAT CAAGGATGCG
AACCGCACCG AGGAAATCAA GCAAGCGCTT CAGGAAGGCA GCCTGCGCGG CATGCACACC
TTTGATCAGC ATCTCGTCCA ATTGGTGCAA GATCACCTGA TCACTGAGGA AGACGCCCTG
CAAGCCGCCA CCAGCCCCCA CGAACTGAAG CTCGCGCTGC TGAGCCGGCA GTTCGCGTAA
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| Protein sequence | MSVLQALLGV MVKSGASDIH LRSGSAPAAR INGNIVRFGE DRLSPDHVAG FAREMMSRPG
LWEEFITRRD ADFAYGVPGV ARFRVNAYYQ RGTVGLIMRV IEEKPIPSFA ELGLPVATFE
ALAAQERGLV LVTGPTGSGK TTTLASILDH INATQPVNIV TLEDPIEILH RDKQALVSQR
ELGTDTLSFA AGLRAAMRQD PDVILIGEMR DKETVEAALS AAQTGHLVFS TLHTLDAIRT
VNRIIDFFAP HERDQIRLAL SESLVGVVSQ RLLPRQGGGR VLGMEILLGT PTVRECIKDA
NRTEEIKQAL QEGSLRGMHT FDQHLVQLVQ DHLITEEDAL QAATSPHELK LALLSRQFA
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