Gene Dgeo_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0250 
Symbol 
ID4058535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp234493 
End bp235209 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID641229252 
Producthypothetical protein 
Protein accessionYP_603722 
Protein GI94984358 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA CTGGACCCCT TCAGAGCCTG TCCCGCGTGC AGGAGCTTGA TCTGGAACTC 
GACCGGTTGC GGGCCGAAGA GGCCAGCATC CCAGATGCGT TGCGGGAGGC CCGCGCCCAG
CAAGAACGCC TGAACAACGA CCTGGAGGAC ACCGAGATCA CCCTGGAGGG CGTGGAAAAG
CAGATCCGGG GCCTGGAACA GGACCTCGCG GGCACCCGCG AGCAGATCAC CCGCGCCCGC
GAGGAGCAGG ACAGGAACGC CTTCGACGCC CGGGCGCAGT CCCAGTACGG CAGCCGCATT
CAGATGCTCT CGGAGCGCGC CGAGGAGATG GAAGAAGACT TGGCCCCCCT GCACGAACAG
CGGCAGGCGC TGACCCGCCG TGCGGCTGAC CTGCGCGCCG AACACCGCAC GCTGCGCCCC
CGCCTGGAGG AACTCGAAGC CCAGGATGAA GCCCGCGTGC AGGGCCTGCG CGCCCAAGGC
GAGGGACTGC GGCAGGAACG GGCGCAGCTT GTCAGTGGCA TAGACGCCCG CACCGTCAAG
GAATACGACC TGATCCGCAA GGCGAAAAAG GGCCTGGGCC TGGTTGAGAT TCGGGGGGGG
CGCTGCACCG GCTGCAACGT GGTGCTGCCG GTCAATGTCC AGCAGAAAGC CGCCCAGGGC
AAGTTGCCGC CCGTCAAGTG CCCCTCGTGC GGGCGCTTCC TGATCAAGCG GGGCTGA
 
Protein sequence
MSDTGPLQSL SRVQELDLEL DRLRAEEASI PDALREARAQ QERLNNDLED TEITLEGVEK 
QIRGLEQDLA GTREQITRAR EEQDRNAFDA RAQSQYGSRI QMLSERAEEM EEDLAPLHEQ
RQALTRRAAD LRAEHRTLRP RLEELEAQDE ARVQGLRAQG EGLRQERAQL VSGIDARTVK
EYDLIRKAKK GLGLVEIRGG RCTGCNVVLP VNVQQKAAQG KLPPVKCPSC GRFLIKRG