| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0227 |
|---|
| Symbol | |
|---|
| ID | 4059135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 213312 |
|---|
| End bp | 213992 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641229227 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_603699 |
|---|
| Protein GI | 94984335 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.448166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTC AAGAGCAAGC CCGGCAGCAG GCGGACCTGT TGCAGGCGTG GATGAGCGCG
CTGCCCGAGT GGGTGCTGAC GACTCGCCCA GACCGCGTCG CGGTGGTCTG CGTGGACCTG
GTCGAGGGCT TCACGCGCGA GGGACCGCTT GCCAGCCCGC GCGTTGCGGA GATCATCCCC
CGGATCGTGC AGCTGCTCCG CCGCCTGCTC GATAGGGGCG TACCTGCCGA GAATGTCGTC
CTGGTGCAAG ACAGCCACCC CCTGGACGCC AAGGAGTTTC AGGCCTACCC GCCTCACTGC
GTTGCCGGAA CAGCCGAGGC GCAGGCGGTG GCCGAGCTGC GTGCGCTGCC TGAGTTTGCC
CGGTTCCAGC ACTTTCAGAA GAACAGCATC GCCAGCCACA CCAGCCCGGC GTTCCAAGCG
TGGCTGGCGC AGGCTGAGTT CGACGTGGTG ATCGCGTTGG GCGACGTGAC GGACCTCTGC
CTCTATACCC TCGCGCTGCA TCTGGTGACC TTCGGCATGG CGAACCAGCA GGACTGGACC
GTCGTCGTGC CGGAGGAGTG CGTCCAGACC TGGGACGCGC CCGATCACCC CGGCGACCTG
TACCACGCCC TCTTCCTGCA CCAGTTGGCG CGCAACGGTG TGCGGGTGGT GCGGGCGCTG
AGCGTGGGCG CCGAGTCCTG A
|
|---|
| Protein sequence | MTLQEQARQQ ADLLQAWMSA LPEWVLTTRP DRVAVVCVDL VEGFTREGPL ASPRVAEIIP
RIVQLLRRLL DRGVPAENVV LVQDSHPLDA KEFQAYPPHC VAGTAEAQAV AELRALPEFA
RFQHFQKNSI ASHTSPAFQA WLAQAEFDVV IALGDVTDLC LYTLALHLVT FGMANQQDWT
VVVPEECVQT WDAPDHPGDL YHALFLHQLA RNGVRVVRAL SVGAES
|
|---|
| |