Gene Dgeo_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0157 
Symbol 
ID4057357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp146843 
End bp147409 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID641229154 
Productexonuclease, RNase T and DNA polymerase III 
Protein accessionYP_603629 
Protein GI94984265 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.32351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TCCCCCACCT GGCCGCCTTG ACCCAGCCGA TCATCTTTGT GGACACCGAG 
ACAGGCGGAC GTGACCCCGC GCGGCATCCC CTGCTGACGG TCGGGCTGGT GACGCTGACG
CCACAGGGCG AGGTCACGCG CCCGCTGCAC CTGCGCGTGC GGCACGAACA CTACGAGGTC
GAAGAGGAGG CGATGGCCGT CAATGGCATC GATCTGGCAA CGCACCATGC CACAGCCCAG
GCCCCCGAAG AGGTGGCGGA AGCGGTGCGG GCCTACGCGC GGGCAGTGGG GCGGGTGATG
CTGGGCGGGC ACAATCTGGC CTATGACCTG GGCTTCCTGC GCTGGCTCCT ACCGGACCTA
AAGAGTATCT TCCGGCGGGG GCGGGTGGAC ACCAAGCTCA CGGCGCAGTT TCTGCTTCAC
GCGGGGATCT TGCCACGCAA GGTGGGGACG CCGCTCGATC AGCTCGCCAA GTACTTCGGG
CTGGCGTACC AGGCCCACGA CGCGCTGGAG GATGCGCGGG TGACCGCGTG GGTGTATGCG
GAGCTTTTGC GGCTAACGGC GCGGTGA
 
Protein sequence
MSALPHLAAL TQPIIFVDTE TGGRDPARHP LLTVGLVTLT PQGEVTRPLH LRVRHEHYEV 
EEEAMAVNGI DLATHHATAQ APEEVAEAVR AYARAVGRVM LGGHNLAYDL GFLRWLLPDL
KSIFRRGRVD TKLTAQFLLH AGILPRKVGT PLDQLAKYFG LAYQAHDALE DARVTAWVYA
ELLRLTAR