Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2672 |
Symbol | |
ID | 4073903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008010 |
Strand | - |
Start bp | 355855 |
End bp | 359436 |
Gene Length | 3582 bp |
Protein Length | 1193 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641228804 |
Product | glycosy hydrolase family protein |
Protein accession | YP_594179 |
Protein GI | 94972139 |
COG category | [N] Cell motility |
COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.947842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCAAC GCAAGCCGAG TACTTCTGCA CTGCGTCTCG GACTGGCCTG TGCGCTGGCC CTGGGCGCCG TGGCCTGTTC CACGCCCCAG TCCCACCCGG ATGCCAACGA CCCGGTGGCC GCCTACCCCT ATCTCCCGGG AGTGGATTAT TCCTGGGCCG ATGTGCCGAA GACGGCTGAT CCCTACCCCG GCGGCCAGGG CTATCCCTGG CACGGCCTGG CGCTGGCGGC GACGAGCACC CCCACCGATC TGGGCCTGAC GACCGATCTA AAGTGGGATT CGGCATCGAG CGGCTACGGC CCGGTCGAGC TCAACAAGAG CAACAACACC AAAACGGGAG GAGATGGCCA GACCCTCACC ATCGGGGGTC AGACCTATGC CCTTGGCCTG GGCGCCCACG CGAACTCTGA TATCCGCTAC ACCCTTCCCG GTGACTGCGC GACTTTTACC GCCACGGTTG GGGTGGACGA CGAGGTGGGG AATCTCGGCA GCGTCGTCTT CCAGGTGTGG GACGGCACCA CCACCAAGCT CTACGACAGC GGCGTGCTGC GGGGAAGTGA CGGCCCCAAA GAAATCACCG TCCCCCTCAC CCGCAGTGAC GGGACGGCGG TTCGCAACCT GCGCTTGGTG GTGACCGATG CGGGCGACGG GATCTCCTAC GACCACGCCG ACTGGGCCAT GCCCAAGGTG TTGAGCTGCA CCGTTCCGCA GGCCTCGGGA GACAAGTTCC TGAGCGACCT GCCGACGGCC ACGCCGCCGG TCAACGGCTA CGGGCCCTAC GAGCTGGACA CGAGCAACGG GGAGCGCCTG GGAGGGGATG GCCGCCCGTT GACGATCGGC GGGACCACCT ATCGCAAGGG CCTGGGCGTG CATGCCGCGT CTGAACTGGT GTATGACCTG GGGGGCAACT GCTCGACCTT CACCGCCGAA GTGGGGGTGG ATGATGAGGT CGGAGACCGC GGCAGCGTGG TGTTCCAGGT GTTTGCCGAC GGGACGGAGC TGTTCAACAG CGGCGTCCGG ACGGGGAAGG ATCCGGCCCT GGCGGTGAAC CAGAGCGTGG CTGGGAAAAA ACAGCTTAAG CTCGTCGTGT CGGGCACTGC GGACGGGATC TCCTACGATC ACGCCGACTG GGCCAATGCC AAGATCAGTT GCTCGGTGAT TCAGCCCACA GTCAGCAGCG TGACGGTGAA CCCCGCAACC CTCAACATGA GTGTGAACGG CACGCAGCAA CTGACCGCCG AGGTCAAGGG CAGCGGTGCC TTTGATCCGG GTGTGACCTG GACCACCAGC GACGCGAAGG TGGCCACCGT CAGCAGCAGC GGGCTGGTGA CAGCGCTCGC TCCCGGCTCG GTCACGGTCA CCGCCACCTC CAACTTCGAT CCCAGCAAGT CGGGCAGTTC ACAGATCACC GTGACGTCGA CCCCAACGCT GCCAGACGGC GGGGTGCTGA TCAACTTCCA GCCGGCCAGT TCCGCCGCCC CGGCAGGCTA CACCAAGGAC ACCGGGGCCG CCTACGACGC GTCGCGCGGC TTCGGGTGGA TTCGTGAGGA CAGCGTGGGC ACGGGCAGCA GTGTGCCGCT CGACATCACG CCCAACACCC GTGACCGCGC TCTGGTGGGG GTGGATGCTC GCCTCAACAC GCTGATTCAC ATGCAGCTTC CGGCCAGCAA CACAACCTCG ACCGGCGTCA AGATTCCCGC CGCCTGGGAA TACGCCTTGC CCAACGGCAT CTACACCGTG ACCGTGGCAG TGGGAGACGC CAGCAACGTC TATGACAGTG CCCACCAGAT CAACATCGAG GGCCAGCTCG CCATCCCCCG CTTCACGCCC ACCGCCACCA AGAAGTTCGT GACGACGACC CTGCGGGCCA ACGTCACGGA CGGTCGTCTC ACGATCGACG CGCGGGGTGG CAGCAACACC AAGATCGACT ATGTGACGAT CCAACCGGGG AACCGCCCCA GCGCCCGCTC GATCAGCCCG CAGGACGGCC AGACGATGGT GTCCACCACC ACGCCGATCA CCGTCGATCT CAACCTGCCC AACAGCGCCA TCGATGACAA CACCTTCACG CCGTCCGCGG TGCGCCTGAT CGACGCGGGG ACCAACGTCG CGGTGAGTGC GCTTTGTGAA ACCTCGGGGG GCGGCGACGT GATCGTCTGC CAGCCCAACC AACCGCTCCA AGCGAACACG AAGTACATCT TCGAGATCAC GGATGGCGTC AAGGACACCA GTGGCGCCGC CTTCCTGCCG GTGCGCACCA GCTTCGTGAC GGGCGCGAGC GGCAGCAGCA CGGGCGACGT GGCCTTTGAA CAGGTGGCGC TCTCCAATGC CCCCGCCATG TCCTATACCT CGGTGGAGAT CGGGCCAGAC GGCAAGCTGT ACGCGGCGAC GCTGAGCGGA GAGATCCTGC GCTTTGGCAT CCTGCCCGAC GGAACCGTCA CCCCGCCAGA GGTGATCAAG TCCGTGCAGC AGGCCAACGG CGGGCCGCGG ACCATCATTG GCTTGAAGTT CGACCCAGCG TCCACCGCCG ACAACCTGGT GCTGTGGATC AGCAACAATG CCTTCTGGGA CGGCCGCACG ACACCGCCGG ACTGGAGCGG CAAGATCACG CGTCTGAGTG GCCCCAACCT GGAGAAGGTA CAGGATTACG TGGTCGGACT GCCCCGCTCG AACCAAGACC ACATGACCAA CTCCATCTCC TTCAGACCTG GGGAACCCAA CGCGCTGTAT GTCCTCCAGG GCAGCAACAG TGCGATGGGT GCGCCGGACA CGGCCTGGGG CAACCGCCCA GAACGGCTCC TGAACGCGGC GCTGCTGCGG GTGGATCTCT CCAAGATCAC CACGCCGCCG CTGGACGTGA AGACGGCGGA GGGCGGCCTG TATAACCCCT ATGCGCCCGG CGCACCCGTG ACGATCTACG CCAGCGGCAT TCGCAACGCC TACGACATGG TCTGGCACAC CAACGGCCAG CTCTATGTGC CCACCAACGG CTCGGCGGCC GGCGGCAATA CGCCCGGGAC GCCCACGCCG CTGCCCGACT CGTGCCGGAC TCGACCCGAC GGAGCCTACA CCGGCCCAGC CGTCCCCGCC CTGAGCAGCG TGGGGGTCCA GCACGACTTC CTCTTCCGCG TGACGCCCGG CGGCTACTAC GGCCATCCCA ACCCGCAGCG CTGCGAGTGG GTGCTCAACG GCGGCAACCC AACGGCGAAT GTCGACCCTG GCGAGGTGCC CGAGTATCCG GTGGGCACGC TGCCCGACCG CAACTGGAAG GGCTTTGCCT ACGACTTCGG AGAGCATGCC TCCGCCAACG GCGTGATCGA GGAGTACAGC AGTGCGCCCA TCACCTCCCT GAAGAACACG CTGTTGGTTG TGCGCTACAG CGCCGGCAAG GACATCATCG TCCTGACGCC TGGCGGTCCC AACCAGGACA TCGTCAAAGC CCAGACCGGC ATCGTGGGGC TGACCAACTT CAATCCCAGC CCGCTTGACC TCACCGAGGA CCGGACGAAC GGCCACCTGT ACGTCGCGCA GCTTGACCAG CGCACCGGGG CGGGCAAACT GACACTGCTG CGGCTGAAGT AG
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Protein sequence | MVQRKPSTSA LRLGLACALA LGAVACSTPQ SHPDANDPVA AYPYLPGVDY SWADVPKTAD PYPGGQGYPW HGLALAATST PTDLGLTTDL KWDSASSGYG PVELNKSNNT KTGGDGQTLT IGGQTYALGL GAHANSDIRY TLPGDCATFT ATVGVDDEVG NLGSVVFQVW DGTTTKLYDS GVLRGSDGPK EITVPLTRSD GTAVRNLRLV VTDAGDGISY DHADWAMPKV LSCTVPQASG DKFLSDLPTA TPPVNGYGPY ELDTSNGERL GGDGRPLTIG GTTYRKGLGV HAASELVYDL GGNCSTFTAE VGVDDEVGDR GSVVFQVFAD GTELFNSGVR TGKDPALAVN QSVAGKKQLK LVVSGTADGI SYDHADWANA KISCSVIQPT VSSVTVNPAT LNMSVNGTQQ LTAEVKGSGA FDPGVTWTTS DAKVATVSSS GLVTALAPGS VTVTATSNFD PSKSGSSQIT VTSTPTLPDG GVLINFQPAS SAAPAGYTKD TGAAYDASRG FGWIREDSVG TGSSVPLDIT PNTRDRALVG VDARLNTLIH MQLPASNTTS TGVKIPAAWE YALPNGIYTV TVAVGDASNV YDSAHQINIE GQLAIPRFTP TATKKFVTTT LRANVTDGRL TIDARGGSNT KIDYVTIQPG NRPSARSISP QDGQTMVSTT TPITVDLNLP NSAIDDNTFT PSAVRLIDAG TNVAVSALCE TSGGGDVIVC QPNQPLQANT KYIFEITDGV KDTSGAAFLP VRTSFVTGAS GSSTGDVAFE QVALSNAPAM SYTSVEIGPD GKLYAATLSG EILRFGILPD GTVTPPEVIK SVQQANGGPR TIIGLKFDPA STADNLVLWI SNNAFWDGRT TPPDWSGKIT RLSGPNLEKV QDYVVGLPRS NQDHMTNSIS FRPGEPNALY VLQGSNSAMG APDTAWGNRP ERLLNAALLR VDLSKITTPP LDVKTAEGGL YNPYAPGAPV TIYASGIRNA YDMVWHTNGQ LYVPTNGSAA GGNTPGTPTP LPDSCRTRPD GAYTGPAVPA LSSVGVQHDF LFRVTPGGYY GHPNPQRCEW VLNGGNPTAN VDPGEVPEYP VGTLPDRNWK GFAYDFGEHA SANGVIEEYS SAPITSLKNT LLVVRYSAGK DIIVLTPGGP NQDIVKAQTG IVGLTNFNPS PLDLTEDRTN GHLYVAQLDQ RTGAGKLTLL RLK
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