Gene Dgeo_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2618 
Symbol 
ID4073849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand
Start bp432423 
End bp433208 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID641228857 
ProductHAD family hydrolase 
Protein accessionYP_594126 
Protein GI94972086 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGC TTGCCTTCGA TCTGGACGGA ACGCTGCTGG ACCGGGACCA CATGGTGCCT 
CCCCGGACCC TAGCGATCAT CGCGCGGCTG CGCGAACACG GCTGCCGAGT CGCCGTGATC
ACCGGACGGG CCGACGTGCC GACGGAGGTG CTGGTGGGTC TGCGCCCAGA CGCGGTGGCG
GTGAATACCG GCGGGCGGGT GTTGGTGGGT GAAGAAGTGT TGGCCGACGA GCACTTCACG
CCCGAGCAAA CGCGGGCGCT GCTGGAGCGG CTGCCCAAGG ATCGCCCGGT CTTCGGCTTT
GGTCCGGGAA CGTTCTACGC ACCCGATCCC CACGCTGCAC ACTTGACCGC CTGGCACGCC
AAGCGGCGAG GGTTGCCACT GGCACACGCC GCGGCAGGCC CGCTGCAAAA ACTGGACATT
GAGCTGGCCT GGAACGATCC CGCCGCGCCC GAACTGATCA CCCCCCTGCG GCAGGTCCCC
GGGGTGAATG TCACCAGCAG TGTCAGCGGC GACCTTCAGT ACCTCACGGT CACGCCGGAA
GCGGCCAACA AGGGCGCTGC AGTGCAGCGG ATTGCAGGGG CGCTGGGCAT TCCCCTAGAC
CACACCCTTG CCTTTGGTGA CAGTGAAAAC GACCTTGCCA TGTTCAAGGT CGCCGGGGTC
GCGGTGCAGG TAGGCGAGGC GGAGTGTTTG CAAGACGCCG CTCACCACCG GGTCAGCTGC
TCGGCGCTTG GCCTCCCCGC CTGGCTGGCC GAGTATGCGG AAGAACTCGC GCGCGAGCTG
GCCTGA
 
Protein sequence
MRLLAFDLDG TLLDRDHMVP PRTLAIIARL REHGCRVAVI TGRADVPTEV LVGLRPDAVA 
VNTGGRVLVG EEVLADEHFT PEQTRALLER LPKDRPVFGF GPGTFYAPDP HAAHLTAWHA
KRRGLPLAHA AAGPLQKLDI ELAWNDPAAP ELITPLRQVP GVNVTSSVSG DLQYLTVTPE
AANKGAAVQR IAGALGIPLD HTLAFGDSEN DLAMFKVAGV AVQVGEAECL QDAAHHRVSC
SALGLPAWLA EYAEELAREL A