| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2474 |
|---|
| Symbol | aroB |
|---|
| ID | 4073705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | + |
|---|
| Start bp | 2611 |
|---|
| End bp | 3828 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641228476 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_593982 |
|---|
| Protein GI | 94971942 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTGA ACCGGGTGAT CGCGCAGACT GTGCCGGTCA CGTTTCGTTA CACCGTTCAG
TTCACCCACG GCCTGTTTCA GCTGGAGAAT CCGGTGCTGC GCACCACGCT GGCCGGGGAC
ACCCAGGACC CTGTCAAGGT GATGTGCGTC ATCGACGCCG GGGTTCTGGC AGCTTTTCCC
GAGCTGCGAG ACCAGATCGG CCGCTATTTC GCCCGGCACG CTGGCGCCCT GCATCTGGTC
GCGCCGCCCC TGATCGTACC AGGTGGTGAG CGCGTCAAGC AGGAAGAAGG CTGGGTGCGG
CAGGTGCAGG ACCAGATTCA CTGCTGCGGG ATCGACCGTC ATTCCTTTGT GATGGTGGTG
GGCGGCGGCG CGGTGATCGA CATGGTGGGC TTTGCAGCTG CCACGGCCCA CCGAGGGGTC
CGGCTGGTTC GGGTGCCCAC CACCGTCCTC GCGCAGAACG ACTCGGGCGT GGGCGTCAAG
AACAGCGTGA ATGCCTACGG CAAGAAGAAT TGGCTGGGGA CCTTCGCGCC GCCCTACGCC
GTGTTGAACG ACTTGGGCTT CTTGCCGGCG CTGGCGGACC GCGATTGGCT GGGCGGGCTG
GCTGAGGCAG TCAAGGTCGC GCTGCTGAAA GACGCTGCCT TCTTCGCCTG GCTTGAGGAC
CACGCCGGAG CGCTGGTGAA CCGCGACCTG ACGGCGATGG AGGACGCGGT TTACCGCTGT
GCGGAGTTGC ATCTCGCGCA CATTGCCGGA AGCGGTGATC CCTTTGAGAT GGGTTCCTCG
CGGCCCCTCG ACTTCGGGCA CTGGGCGGCG CACAAGCTTG AGAGCCTGAC CGCCTACACG
CTGCGCCACG GTGAGGCGGT GGCGGTAGGC TTGGCCCTCG ACTGCACCTA TGCCGTGCTC
AAGGGCCTGC TCCCCGAAGC CGACTGGCGG CGCGTCCTCG ACCTGCTGCT GGCGCTGCGG
CTCCCGGTCT ATGTACCGGA ACTGGGTACC TCGGCCCAGG ACCCCGCAGA CCCCATGAGC
GTGTTGAGCG GCTTGAACGA GTTCCGCGAG CACCTGGGCG GGCGCCTCAC CGTCCCGCTG
CTGACCGCCG TCGGCCAGAT GACCGAGGTG CATGAGCTGG ATCTCGGCCT GCTGCGCCGC
AGTGTTGGCC TGCTCAAAGA CCTGCACGAC CACCACTCAG GAGCGATATG TCTGCCTACG
CCAATCCCTG CCTGCTAA
|
|---|
| Protein sequence | MPLNRVIAQT VPVTFRYTVQ FTHGLFQLEN PVLRTTLAGD TQDPVKVMCV IDAGVLAAFP
ELRDQIGRYF ARHAGALHLV APPLIVPGGE RVKQEEGWVR QVQDQIHCCG IDRHSFVMVV
GGGAVIDMVG FAAATAHRGV RLVRVPTTVL AQNDSGVGVK NSVNAYGKKN WLGTFAPPYA
VLNDLGFLPA LADRDWLGGL AEAVKVALLK DAAFFAWLED HAGALVNRDL TAMEDAVYRC
AELHLAHIAG SGDPFEMGSS RPLDFGHWAA HKLESLTAYT LRHGEAVAVG LALDCTYAVL
KGLLPEADWR RVLDLLLALR LPVYVPELGT SAQDPADPMS VLSGLNEFRE HLGGRLTVPL
LTAVGQMTEV HELDLGLLRR SVGLLKDLHD HHSGAICLPT PIPAC
|
|---|
| |