Gene Dgeo_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2470 
Symbol 
ID4073701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008010 
Strand
Start bp6131 
End bp7000 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID641228480 
ProductUbiA prenyltransferase 
Protein accessionYP_593978 
Protein GI94971938 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0292823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCTA GCACATTGCG TCCCGCTTGG CGCCAGCGAC TGTACGGGCA CCTGTCACTG 
GCTCGCGTCT CCAACAGTCC CACGGTGGTC TCTAACGTGC TTGCGGGTGC AGCGCTGGCG
GGTGGAGCTG GGCTTCCGCT GGTCCTCCTG GCCGCGGCAA TGCTGCTGTT TTACACCGCT
GGGATGTATC TCAATGATCT CCTCGATCTC CGGACCGACC GCCGCGAACG TCCCGAGCGC
CCGCTGCCTT CCGGCCTGAT TTTGCCGGGC GAGGCCTGGG TGGTCACCGC CGGCTTGTTT
GGACTGGGCG GATGGCTGCT GTGGCTGGCG GGAGGCGCGG CCTTTCTGAG CGGCCTGGTC
CTGCTGGGCC TGATTGTGCT GTATGACGCC TGGCACAAGA CCAACCCGCT CAGTCCTCTG
GTGATGGGGC TTACCCGCGC GCTGGTGTAT GTCACGGCGG CTTTTGCCTT CGTGTCGCAC
CTCAGCTCAT CCCTGCTGAT CTGGAGCGCA CTGCTTACGC TCTATGTGGC TGGGCTGACC
TACGTTGCCA AGACCGAGCA CCGTTCCGGC CCGGCGCGTT TCTGGCCGGT TGCACTGGTG
CTGGCGCCCG CTGTGTATGC GTATGTGGGG GGCTTTGCCT GGCCGGTATG GATGCTGGCC
CTGTTGCTGG CGGCCTGGGT GGGCCGCAGT CTGACCTTCG TCTACGGTCC CCAGCGCAAT
ATCGGCGGCG CGGTGGGTCG GATGATTGCC GGAATTTCGC TGCTAGATGC CCTGGTGCTG
GGGGGAGCGG GCGCGTGGGC GCTGCTGCCC TGGGCACTGG CCGCCTTCGC TCTGACCCGC
TGGTGGCAGC GGCACATCCA AGGAACCTGA
 
Protein sequence
MSSSTLRPAW RQRLYGHLSL ARVSNSPTVV SNVLAGAALA GGAGLPLVLL AAAMLLFYTA 
GMYLNDLLDL RTDRRERPER PLPSGLILPG EAWVVTAGLF GLGGWLLWLA GGAAFLSGLV
LLGLIVLYDA WHKTNPLSPL VMGLTRALVY VTAAFAFVSH LSSSLLIWSA LLTLYVAGLT
YVAKTEHRSG PARFWPVALV LAPAVYAYVG GFAWPVWMLA LLLAAWVGRS LTFVYGPQRN
IGGAVGRMIA GISLLDALVL GGAGAWALLP WALAAFALTR WWQRHIQGT