| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2454 |
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| Symbol | |
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| ID | 4073682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008010 |
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| Strand | + |
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| Start bp | 30016 |
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| End bp | 32100 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641228499 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_593962 |
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| Protein GI | 94971922 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.86013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA CCCACCCGCA GACCGTCATC CCCAACCGTT GGAACGACGC CGAAGCTCCG
CAGGGAGACG GCCTCACGGC GCTGACCTAC CGCTCGCGCC TCCTCGGAGC AGACCGCCGC
CTGGTCAATA TCTACGGCGG CAATACCAGT ACCAAGAGCG TTGAGAAAGA CCATCTGGGC
CGTGATGTGA CGGTGTTGTG GGTCAAGGGA AGCGGCTCAG ACATCGCCAC CATCACCGAG
CAGGGCTTTG CGGGGCTCAA GCTGGATGAG GTGCTTCCCC TGTTCGGGCG CGAGCACATG
ACCGATGAAG AGATGACCGC CTACCTTGAA CGCACCACGT TTGAGCCGGG TCGTCCTCGC
CAGAGCATTG AGACGCTGCT GCATGCTTTT GTTCCGGCCA AGCACGTGGA TCACACCCAT
CCCGACGCGA TCATCGCCAT CGCCTGCACG CCGAGGGGCC AGGAGATCGT GCGCGAGATC
TATGGGGACC GCGCCGCCTG GGTGGACTAC ATCCGCCCCG GCTTTACCCT CTCGAAACAA
ATCGGAGAGG CCGTGCGCAA AAATCCCAGG TTGGAAGCCG TTGTGATGGG CAAGCACGGC
CTGGTCACGT GGGGGAACAC CGCCAAGGAG AGCTACGAGA ACACCTTGCG AATCATTCGT
GAGGCTCAGG CGTACCTCGA CGCGCATCGG GAGGCGCAAC CCTTCGGTGG CGCGCGGGTC
TCGAGCGTGC CGGAGGAAAC GGCGAAGGTC CTGTTGGCCA GCGTGCTGCC GGTGCTGCGC
GGCGCCATGA AAGGGGCGCG GCCGGTGATC CTTACGGTGG ACCGCAGTCC GGAGGTGATG
GCGTTTGTGA ATTCAAACGC GGCGGCGGCG TTGTCGCAGG TGGGCGCGGC CTGCCCCGAT
CACCTCGTTC ATACCAAGCG GGTTCCCCTC TTTCTGGACT GGACGCCCGA TCAGGGCCAA
GCGGCCTTGC TTCAGGCGGC GCGGGAAGGG GTCGAGCGCT TTAAGGCCGA ATACACCGCC
TATTTTGAGG AGAACCGGCA TGAGGGCGAT GTGATGTTCA GTCCCAGCCC GCGCGTGATT
CTGATTCCCG GTCTGGGCAT GGTGAGTAGC GGGCCGGACG CGCAGGGTGC GGATGTATCG
CGTCAGCTCT ACCTGCGCGC GATCCAGGTC ATGCAGGGCG CGAGCAGCCT GGGCGGCTTT
GTGTCGCTGA CCGCTGCAGA GAGCTATGCG GTGGAGTACT GGCCGCTGGA GCTGTACAAA
CTCGCGCAGA AGCCTGCCCC GAAAGTGCTG GAAGGGCATG TCGCCCTGGT GACGGGGGCA
GCGAGCGGAA TAGGCCGCGC GATTGCTCGC CGCCTCTCGC AAGACGGCGC CCATGTGGTC
ATTGCGGACC TGAACGCAGA GGGTGGGCAG CAGGTCGCAG GGGAGATCAC GGCGGAGCGC
GGGTACAGGC GGGCCGTTGG TGTCCCCATG GATGTCACCG ATGAGACGCA GGTGCAGGCG
GCCTACCAGA CCGCGATCCT CGAGTATGGC GGCGTGGATA TCGTGGTCAA CAACGCGGGC
ATTGCCTCCA GTGCCCCCAT CGAAGACACC AGCCTGGAGA TGTGGAACAG AAACCAGAGC
ATCCTCTCGA CCGGCTATTT CCTGGTCGCG CGCGAAGCGT TTAGGATCCT CAAGGCGCAG
GGGACTGGCG GCAACCTCGT CTTTATTGGC TCCAAAAATG CTCTCGCCGC CGGAAAAAAT
GCGGCCGCCT ACAGTGCGGC CAAGGCCGCC GAAATTCACC TGGCCCGCTG CCTTGCAGAG
GAGGGCGGAG CAGCCGGCAT CCGTGTCAAC AGTGTTTTGC CCGATAGTGT TCTTTCTGGC
TCTGCGATCT GGGACGGGAA GTGGCGGGCG GAGCGCGCGG CGACCTATGG CATCCGAGAA
GATCAGCTCG AAGAGTTCTA CCGCCAGCGC AACACCCTCA AGGTGAATAT CCTGCCCGAG
GACATCGCGG AGGCAACCTT CTTCTTCGCG ACGCCTGCTG CGAGCAAAAC CACCGGCGGC
ATCCTCACGG TGGACGGCGG TGTTCCTCTC GCCTATGTCC GCTGA
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| Protein sequence | MTTTHPQTVI PNRWNDAEAP QGDGLTALTY RSRLLGADRR LVNIYGGNTS TKSVEKDHLG
RDVTVLWVKG SGSDIATITE QGFAGLKLDE VLPLFGREHM TDEEMTAYLE RTTFEPGRPR
QSIETLLHAF VPAKHVDHTH PDAIIAIACT PRGQEIVREI YGDRAAWVDY IRPGFTLSKQ
IGEAVRKNPR LEAVVMGKHG LVTWGNTAKE SYENTLRIIR EAQAYLDAHR EAQPFGGARV
SSVPEETAKV LLASVLPVLR GAMKGARPVI LTVDRSPEVM AFVNSNAAAA LSQVGAACPD
HLVHTKRVPL FLDWTPDQGQ AALLQAAREG VERFKAEYTA YFEENRHEGD VMFSPSPRVI
LIPGLGMVSS GPDAQGADVS RQLYLRAIQV MQGASSLGGF VSLTAAESYA VEYWPLELYK
LAQKPAPKVL EGHVALVTGA ASGIGRAIAR RLSQDGAHVV IADLNAEGGQ QVAGEITAER
GYRRAVGVPM DVTDETQVQA AYQTAILEYG GVDIVVNNAG IASSAPIEDT SLEMWNRNQS
ILSTGYFLVA REAFRILKAQ GTGGNLVFIG SKNALAAGKN AAAYSAAKAA EIHLARCLAE
EGGAAGIRVN SVLPDSVLSG SAIWDGKWRA ERAATYGIRE DQLEEFYRQR NTLKVNILPE
DIAEATFFFA TPAASKTTGG ILTVDGGVPL AYVR
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