Gene Dgeo_2401 details

Gene Information

• Locus tag: Dgeo_2401
• ID: 4073629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Deinococcus geothermalis DSM 11300
• Kingdom: Bacteria
• Replicon accession: NC_008010
• Strand: +
• Start bp: 86915
• End bp: 87361
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641228552
• Product: phenylacetic acid degradation-related protein
• Protein accession: YP_593909
• Protein GI: 94971869
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.203664
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCGC TAGAGGGACC GCAGGCGGTC GCCTTCGCCC AGAGCGTGCT GGACGCGCAG 
CCTTTCAGCG TGCTCGTCGG GGCGCGGGTG GAGCAGATGG CCCCCGACGG CGTGGTTGTG 
CGCGTGCCCT TTCGCCGCGA CCTCACCCAG CACCACGGGT TCGCGCACGG GGGCCTGCAG 
GCCGCGCTCG CCGACATCGC CCTTACCTTT ATGGGCGCGG CGGCGCTGGG ACCGCGCGTG 
CTGACCAGCG AATTCAAGAT CAATTTCCTG CGGCCCGGCA TGGGTGAGGC GCTGGTGGCC 
CGCGGGAGCA TCATCAGTGC CGGGAAGCGG CAGGCGGTGA CGCGCTGCGA CATCTTCGCC 
GTCCAGGCCG GCGAGGAAAA GCTGGTTGCC ACGGCCCTGG GCACCATCGT GACGGCGGAC 
GTGCCCCCGG CGGGAGGAAC CGAATGA 

 

Protein sequence

MTALEGPQAV AFAQSVLDAQ PFSVLVGARV EQMAPDGVVV RVPFRRDLTQ HHGFAHGGLQ 
AALADIALTF MGAAALGPRV LTSEFKINFL RPGMGEALVA RGSIISAGKR QAVTRCDIFA 
VQAGEEKLVA TALGTIVTAD VPPAGGTE