| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2353 |
|---|
| Symbol | |
|---|
| ID | 4073581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008010 |
|---|
| Strand | + |
|---|
| Start bp | 136257 |
|---|
| End bp | 137267 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641228599 |
|---|
| Product | high-affinity nickel-transporter |
|---|
| Protein accession | YP_593862 |
|---|
| Protein GI | 94971822 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3376] High-affinity nickel permease |
|---|
| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0532549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCT CTTCACCTGA CGCCGCCCCC CGGGCCGACC TCGCCGCGCC GCTCACCCTG
CGCCAAAGCG TGCTGCAGGG CCTTCCCTAC CTGCTGGTGG TGTTGCTGCT GCACGGGCTG
GCCCTGGTCC TGTGGGTGCC CGCCGCCCTG CACGCGCCGC TGCTGTGGGG CGTGGGTTTC
ACCGCCTACC TGTTCGGGCT GCGGCACGCC TGGGATGCCG ACCACATCGC CGTGATCGAC
AACACCGTCC GCAAGCTGCT CACGCTGGGC CGCCCGGCCT ACGGGGTGGG CCTGAGTTTC
AGCCTGGGGC ACTCGGCGGT GGTGTTTCTG ATGGCCGTCG CGGCGGCGAT CGTCGGCAAG
GCGCTGCTGG GTGCGCAGGA AGGCATCGGC GCTTTTGGGG GCTGGGTGGG GCCGTTTGTG
GCGGGGGCCT ACCTCGTCAC GGTGGCCGCC GTCAATCTGT CCTCGGCCCT GCAGATTCTG
CGGGCGGGGG ATGAACCGGG GCACCAGCAC AGTGGCCTGC TTGCGCGGCT GATCGCGCCC
CTCACCCGGC TGGTGAGCTG GCAGTGGCAG GTGCTGCCGC TGGGCTTCCT GATGGGTCTG
GGCTTCGATA CGGCCTCTGA GGTCGCGCTG CTGGCCCTGT CGGGCACGGC AGCGCAGCAG
GGGCTGAGCT GGGCGGCGAT CCTCTCGCTG CCGCTGCTGT TTGCCGCCGG AATGACGCTG
CTCGACACCC TCGACGGCGT CGCCATGGCC CACGCCTACG GCTGGGCGCT GCACAACCCG
CGCAGCAAAC GCACCTATAA CCTGCTGGTC ACCGGGCTGT CGGGCGTGAT TGCCCTGGTG
ATCGGCGTAG TCACGCTGGC GCAGTGGGCG GGGGAACACT TCCCGGCTGC CGAGGCCTCT
CTGGCGGCCC TGCAAGACGT GGACGTCTCC CCGCTGGGCT TCTGGTTGGC GGGCCTGACG
CTGCTCCTCT TTGTGGCCGC TCAGCTGTGG ACACGGGCGC GCCGGGTGTG A
|
|---|
| Protein sequence | MTRSSPDAAP RADLAAPLTL RQSVLQGLPY LLVVLLLHGL ALVLWVPAAL HAPLLWGVGF
TAYLFGLRHA WDADHIAVID NTVRKLLTLG RPAYGVGLSF SLGHSAVVFL MAVAAAIVGK
ALLGAQEGIG AFGGWVGPFV AGAYLVTVAA VNLSSALQIL RAGDEPGHQH SGLLARLIAP
LTRLVSWQWQ VLPLGFLMGL GFDTASEVAL LALSGTAAQQ GLSWAAILSL PLLFAAGMTL
LDTLDGVAMA HAYGWALHNP RSKRTYNLLV TGLSGVIALV IGVVTLAQWA GEHFPAAEAS
LAALQDVDVS PLGFWLAGLT LLLFVAAQLW TRARRV
|
|---|
| |