| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4778 |
|---|
| Symbol | |
|---|
| ID | 4073372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5647396 |
|---|
| End bp | 5647770 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637986822 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_593851 |
|---|
| Protein GI | 94971803 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0156379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00784209 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCAA AAGTAAATGT TGCCTCGAAG CTTTCGCTGT TTAACGAGCA CTACAGTCCG
AAGATTATTG GCGAGGTCAA CGACCTCTAC GTCAAGGTCG CGAAGCTGCA AGGCGAGTTC
ACGTGGCACC ACCATGAGAA CGAAGACGAG CTCTTCTACG TGGTGAAAGG CGCGCTGCGC
ATGAAGGTCC GCGAGAACGG CAAGGAAAAT GAGTTTCTCA TCATGCCGGG TGAGTTCATC
GTGATCCCCT GCGGCATGGA ACACCTGCCG TCGGCCGATG AAGAGACGCA CATCATGCTG
CTCGAGCCAA AGACGACGCT GAATACCGGC AACGTGGTGA ATGAGAGAAC AGTGTCGGAT
CTGGAAAGAA TTTAG
|
|---|
| Protein sequence | MLAKVNVASK LSLFNEHYSP KIIGEVNDLY VKVAKLQGEF TWHHHENEDE LFYVVKGALR
MKVRENGKEN EFLIMPGEFI VIPCGMEHLP SADEETHIML LEPKTTLNTG NVVNERTVSD
LERI
|
|---|
| |