Gene Acid345_4777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4777 
Symbol 
ID4073371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5647018 
End bp5647344 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content58% 
IMG OID637986821 
Productanti-sigma-factor antagonist 
Protein accessionYP_593850 
Protein GI94971802 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00603517 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00801685 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAAAT CGCTCACAGT TACTGTGATC GGCGAAGAGG GCGAATCGCC GATTGTCCTG 
CACCTCCGCG GGCCGGTCCT GATCTCCAAC CTCTTCGACT TCCAGGCACA CGTGCGAGAG
GTGAAGGCGA AGGACCTTGT CATCGACATG ACCGAGGTCC CGTATATCGA CTCGGCAGGC
GTCGGCGTCT TGGTCGGCGC GTATGTGCAT CGTCAGAAGG AGAGCCGCAA CCTCGTTCTG
GTCGGTGTCC AGGATCGGGT GCGGAGCGTC CTGCAAGTCA CACAGGTAGA ACGCTTTTTC
ACGTTTGCCA ACAAAACCGC GTCGTAA
 
Protein sequence
MDKSLTVTVI GEEGESPIVL HLRGPVLISN LFDFQAHVRE VKAKDLVIDM TEVPYIDSAG 
VGVLVGAYVH RQKESRNLVL VGVQDRVRSV LQVTQVERFF TFANKTAS