Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4777 |
Symbol | |
ID | 4073371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5647018 |
End bp | 5647344 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637986821 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_593850 |
Protein GI | 94971802 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00603517 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00801685 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATAAAT CGCTCACAGT TACTGTGATC GGCGAAGAGG GCGAATCGCC GATTGTCCTG CACCTCCGCG GGCCGGTCCT GATCTCCAAC CTCTTCGACT TCCAGGCACA CGTGCGAGAG GTGAAGGCGA AGGACCTTGT CATCGACATG ACCGAGGTCC CGTATATCGA CTCGGCAGGC GTCGGCGTCT TGGTCGGCGC GTATGTGCAT CGTCAGAAGG AGAGCCGCAA CCTCGTTCTG GTCGGTGTCC AGGATCGGGT GCGGAGCGTC CTGCAAGTCA CACAGGTAGA ACGCTTTTTC ACGTTTGCCA ACAAAACCGC GTCGTAA
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Protein sequence | MDKSLTVTVI GEEGESPIVL HLRGPVLISN LFDFQAHVRE VKAKDLVIDM TEVPYIDSAG VGVLVGAYVH RQKESRNLVL VGVQDRVRSV LQVTQVERFF TFANKTAS
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