| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4728 |
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| Symbol | |
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| ID | 4070666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5590047 |
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| End bp | 5592203 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637986772 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_593801 |
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| Protein GI | 94971753 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.346608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACCA AGATCGGCCG CAACGACCGT TGTCCGTGCG GCAGCGGGAA AAAATACAAG
CTATGCTGCC TGGTGCGTCC GTCGAACGCA GCACGGCTCA TGATGGCACG CGAACACCAC
GAGGCCGGAC GGCTGCAACC CGCAGCAAAG ATCTATGAGC AGGTCTTACG GGGCGATCCG
AATAACGTCG AGGCTCTTCA TTCGCTTAGC ATCCTCGCCA GCCAGATCGG CGAGACGGCT
ACGGCAGAGC GCCTGATGCG GCAGGTTCTC AGTTTGCAAC CGGAACACGT CGGCGCACTC
AGCAATTTAG GGATCACGTT GCAATCCCAA GGACGCCAAG AAGATGCGAT TGCCTGCTAC
GAGAAGGTAA TCGCGCTCCG CCCTCACCAC GCCGAAGCGC ATAACAACCT TGGCAATCTG
CGCTTGGCGC AAGGCGATTT GGAGCAGGCG ATTGCGAGTT ACCAGCGCGC GCTGGACTTG
AAGCCTGACT ACGCGGACGC GCATTACAAC TTGGGAAATG CCTATCAACG TCGCGGAAAT
TGGACGCAAG CAAGAGAAAG TTATAGACGT GCCGTGGCGT CACGTCCCGA ATTTCCAGAA
GCACAAAACA ATCTCGGAGT AGTGCTGCGG GAGATGGGCG AGACGTCCGC GGCGATTGAG
GCCTTCGAAC GGGCAATTGC GCTTCGCGCG GAATATGCAG ACCCGCTCAA CAATCTCGGT
GTCGCGCTCC AGGAACAGGG CCGAATGTCG GCCGCGGTCG AACACTATCA CCAAGCGATC
GCGTTGCGTC CTGCGGATGT GGAAGCGCAT TTCAATCTCG GCAGCGCACT ACAGGAACTC
CACCGTACCG ACGAGGCAAT CGCCGCCTAT CAAAGTGCGC TGGAGATTCA ACCTGGCTAC
TTGCCCGCGT ACAGCAATTT GCTGCTGCTT TACGCTTCAA CAGGTTGCGT TTCACCCGCG
GAAGAGCTCG CGTTCGCACT CGGCTGGGAA CGGGCAGCCC TCACCGAGGA GGAACGCGCG
GAAGCCAGAA GTAGGAGGTT CGTCCGGACA CATCTCGCAG GAAGAAAGCT GCGGATAGGC
ATCGTATCGG CGGAGCTGGG CGAACACGCC GTTGCCGATT TTCTTGAGCC GCTGCTGAGT
GAGATTGACC GCAGCCAGTT CGAATTGCTC TTGTTCCCGA CTCGGCTGCG CGATGGCGCA
CGCACCCAGC GTCTGCATGC GCTTGGCGAT AAGGTCATTT CGCTGGCGCA GGTTCCGGAT
GCTGCGGCAG CAGAGGTTAT ACGCAAAGAA GGCGTAGACG TGCTGATCGA TACCACCGGG
CATACTCGCG GCTGTCGCCT CGGAATCTTC GCGCATCGGG CGGCGCCGGT GCAGATGACG
TGGATCGGCT ACTGGAGCAC GACAGGACTC ACCGAAGTGG ATTGGGTGCT CGCGGATGAC
AAGCTGCCGG CCAGCTTCGA TGCTCATTTC TGCGAAGGCA TCTGGCGAGT ACCTCGGTTG
CCCTTGGTGT ATCGCGGCGA CACTGCTCTG CCTCAGAGCG CATGGACACC GAGCGCAGAC
GGCACGCTTT GGTTCGGAAG TCTTAACCGG TACTCGAAGA TCGGCCAGGA GAGCCTCGAT
CTTTGGGCGA AGGTGATGGA AGCAGTACCG AAGTCGAAAC TCCTTCTCGA GGATCGGACC
GCAGATGATA CTGATGCGCA TCAGCGCATA TCGGCGGAAC TCGCGACCCA CGGTATCGGC
GCCGATCGAA TCGAGTTCGA GCCATACATC CCCGGACACG AGCGCCATAT GCGCCTCTAC
GACCGCGTTG ACGTCGCACT CGACACCATC CCGCTCAATA GCGGTACGAC GGCTTGCGAC
GCTCTCTGGA TGGGGGTGCC TCTGGTTGCG ATGGAGGGGA ACCGTACCGC ATCACGCATT
GCGGCAGGAT TTCTGCGCGC CATCGGCCGT ACAGAGTGGA TTGCGGATAG CGAGCAGAAC
TACATTTCGA AGGTTGTCGA ACTGTCGAAT AATGTCGAAC TGCGCAAGCA ATTGCGCGGC
TCGCAGCGTC AACGGATGGT CGAAAGTTCA TTGTGCGATG CCCGCGGACT GGCGCGCGAA
CTTGAGCAGA CGTTCGTGCA GATGTTCGAC CGCTGGACGG CCGCGCAGAC GTCTTGA
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| Protein sequence | MTTKIGRNDR CPCGSGKKYK LCCLVRPSNA ARLMMAREHH EAGRLQPAAK IYEQVLRGDP
NNVEALHSLS ILASQIGETA TAERLMRQVL SLQPEHVGAL SNLGITLQSQ GRQEDAIACY
EKVIALRPHH AEAHNNLGNL RLAQGDLEQA IASYQRALDL KPDYADAHYN LGNAYQRRGN
WTQARESYRR AVASRPEFPE AQNNLGVVLR EMGETSAAIE AFERAIALRA EYADPLNNLG
VALQEQGRMS AAVEHYHQAI ALRPADVEAH FNLGSALQEL HRTDEAIAAY QSALEIQPGY
LPAYSNLLLL YASTGCVSPA EELAFALGWE RAALTEEERA EARSRRFVRT HLAGRKLRIG
IVSAELGEHA VADFLEPLLS EIDRSQFELL LFPTRLRDGA RTQRLHALGD KVISLAQVPD
AAAAEVIRKE GVDVLIDTTG HTRGCRLGIF AHRAAPVQMT WIGYWSTTGL TEVDWVLADD
KLPASFDAHF CEGIWRVPRL PLVYRGDTAL PQSAWTPSAD GTLWFGSLNR YSKIGQESLD
LWAKVMEAVP KSKLLLEDRT ADDTDAHQRI SAELATHGIG ADRIEFEPYI PGHERHMRLY
DRVDVALDTI PLNSGTTACD ALWMGVPLVA MEGNRTASRI AAGFLRAIGR TEWIADSEQN
YISKVVELSN NVELRKQLRG SQRQRMVESS LCDARGLARE LEQTFVQMFD RWTAAQTS
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