| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4610 |
|---|
| Symbol | |
|---|
| ID | 4070767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5463282 |
|---|
| End bp | 5464457 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637986650 |
|---|
| Product | putative mannose-1-phosphate guanyltransferase |
|---|
| Protein accession | YP_593684 |
|---|
| Protein GI | 94971636 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.157776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.623431 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTAA GGGCCATACT CGTCGTCGGC AACACCGCGC CTGCCAATAC CAAAGCGCCG
CGCACTGAGT CCTTCGCGGG ATTACCGCTC GCCCTCTACG ATGTGCTCGG CAAGTCGGTC
CTCGCACGCA CTGTCCAGCG CCTGCAGCAT TTCGGCATCA CGCAGTTCAC TACCGTGTGC
GATGAGAAGA CTGGCGGCGC GCTTGACGCT CGCGTGAAAC AGGAATGGAA CGTTGTCGTC
GAAGATCACG GCCTCTGGCG CTCTGCCGAG TCGGTCTTCA ATGACTTCGT GCAGCAGGGC
GCCGAACTGG TGCTCGTTCT GCGCATCGGC GCCTACGCCG AACTCGATTA CGAAGAATTC
GTCCAGTTCC ATCTCGAACA GCACGGGCGC GCTACCGTCG CCGTGGACGC TCGCGGTTAC
CGTATCGGCA TTGTCGCGCT CTCTGCTTCA CGTCGCAACG ACGCCGCCTA CCTTTTCCGT
CACAACATGG AAGAGTTCCG GGTGCCCTGC GTGCAATATC AGTTCCGCGG CTATCTCAAC
CGCCTCATCA CGCCTGCTGA CCTTCGCCAG CTCAGCGTTG ACGCGCTTCT CCAGAACAAC
CACATCCAGC CCATCGGCCG CGAGATTCGG CCTGGCGTCT GGGCAGGCCC ACGCGCGCGC
ATTCATCCCC GCGCCCGCAT CGTCGCCCCG GCGTACATCG GAGAGCGAGC CAAGCTCCGC
GCCTCCGCTG TCATCACCCG CTTCACCTGC ATCGAACATC ATGCCGTCGT GGATTGCGGC
ACGGTGCTTG AGAACACTTC GATCGCGCCC TATACCTACG TCGGCGCCGG GCTCGATATC
AATTACGCCA TCGTCGGCCG CAACCGTATC GCCAGTTTGC GTCGCAATGT AGAGGTCGAA
ATTAAAGACC CGAGGTTGCT GTCGACACTC GCAACCAGTG CTCCAGTCCG CGCCCTGCGC
GAGATGGGGG CCCTCGCTGC ATATTTGCCC CAACAGTTGT TCCGCGGCAT GTTCTCGCGG
TCCCAGCGCA CCATGCCGAC GGACATCCCG GCCGCAGTCA ATACTCCTTC CGCAGCGTTG
AAGGAGCCGG CCCTAACGAA CCCAGGTGGG AGCATCAACT CAACACCAGA GTTCCCCTCC
GAATTAGTGG TAGTGAGGAG ATATGGAAAC GAGTAG
|
|---|
| Protein sequence | MDVRAILVVG NTAPANTKAP RTESFAGLPL ALYDVLGKSV LARTVQRLQH FGITQFTTVC
DEKTGGALDA RVKQEWNVVV EDHGLWRSAE SVFNDFVQQG AELVLVLRIG AYAELDYEEF
VQFHLEQHGR ATVAVDARGY RIGIVALSAS RRNDAAYLFR HNMEEFRVPC VQYQFRGYLN
RLITPADLRQ LSVDALLQNN HIQPIGREIR PGVWAGPRAR IHPRARIVAP AYIGERAKLR
ASAVITRFTC IEHHAVVDCG TVLENTSIAP YTYVGAGLDI NYAIVGRNRI ASLRRNVEVE
IKDPRLLSTL ATSAPVRALR EMGALAAYLP QQLFRGMFSR SQRTMPTDIP AAVNTPSAAL
KEPALTNPGG SINSTPEFPS ELVVVRRYGN E
|
|---|
| |