| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4608 |
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| Symbol | |
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| ID | 4070765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5457809 |
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| End bp | 5462023 |
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| Gene Length | 4215 bp |
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| Protein Length | 1404 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637986648 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_593682 |
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| Protein GI | 94971634 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.406661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAA GTTTTATTTA CTGTTCCCTG TTCCTCTCAT TCGTCGTATC TGCGGCAGTT
GCGCAGGACT TCGAGATCAA CGGCGGCCAG CAGCAGCAAA CACCGGCGCC GCAGAAAGCC
GGTAAAAAAT CCAAGGGCAA AGCTGCGTCT TCCGCTCCCG CCAACGGCGG CAGCAACGAA
ATCGGTTGGG GGAATAGCAT CGAGGTCGGC CGTCTGGCTC GCGCCGCGCA GGATGCCCTG
AAGCACGGCA ATCCTGCCGC GGCCGCCACG TATGCTCAGC GCGCCGTCCA GGCTGCTCCG
CAGAACAGCA AGCTGTGGCT GCTCCTTGGC TACACCTCGC GCCTCGCCGG ACGCAACCAG
GAATCGATCA ACGCCTACAA CCACGCGATC CAGACCGATC CCAAGTCTCT CGACGCGAAA
TCAGGCCTCG CCCAGACCTA TATGAAGATG GGCCGCACCG ACGAAGCCAA GCGCTTGCTC
GCGCAAGTGC TCGCCGCCGG TTCCACCCGC CAGAATGACC TCCTCGTCGC CGGCGAACTC
TATCTCAGGA CCAAGGACTA CCAGCAGGGC ATCAACTACC TGCAACGCGC TGACAACCTG
AAGCCCAATG CGCACGCCGA GCTGCTGATG GCGATGGGCT ACATGAAGAT GAAGCAGCCG
CAGAAGGCCA AGCAGCTTCT CGACATGGCC AAGCGCCGCG CGCCGAACAA TGTCGAGATC
TTCCAGGCGG TCGCCACTTT CTATCGCGAA GACCACGACT ACAAGAACGC CATCGCGACG
TTGAACAGCG CGCCGCGCAA GACGCCCGCA TTGCTCGCCG ACCTTGGCTT CACCTACGAA
CTCTCTGGTG ATAAGCAGAG CGCCGCCGCT ACTTACGTGA AGGCGGCCAA CGCCGCGCCG
AAAGAAATCA AGTTCCAGCT CAGCGCCGCG CAATCGCTCA TCCAGAGCGG CGATAAGACG
AAGGCCCAGG ATTTCCTGAA GCGCGCCGCC GCCATCGATC CGAATCATTA CCGCTTGCAC
GCCATCCGCG CCGGACTCGC GAAGTCCGAG AACCGCAACG ACGAAGCGGT GAAGGAATAT
CAGCTCGCCC TTTCCGCGAT GCCGAAGGAA GGCGTCCCCG AAGGCCAGCT CTATCCGGTG
CTTCTCCGCT TAAATTTGTC TGAAGCGCTG AAAGATACCG GCAACACCGA AGCCGCCAAA
CAGCAAGTTG AAATTGCCGA GCAGGAAATT TCCAAGATTA ACGTGGAAGG CCCGGCAAAG
GCTGAGTTCC TCCGCGTGCG CGCGTCGATC AAGGCCAGTG GCGAAGACTA CGCCGGTGCC
GAAGCTGATC TGAAGGAAGC GCAGAAGCTC GATCCCGACA ACCAGCTCAT CACCCTCCAG
TACGCGAACC TGCTCTGGAA GGCCGGGCGC AAAGACGAGT CGAAGCAAAT GTACCTCGGC
ATTCTTCAGG GCGATCCGAA AAATCGTTAC GCCCTCGAGG CCCTCGGTTA TCTCGCGCGT
GACGTGGGCG ACACCGCCGG CGCCGAGCAT TACTTCACCG CGCTCGCGCA GGCTTATCCC
GACGACTACA TCGCATACCT GGCGCTCGGC GATCTCTACA CCGCCACTCG CGACTTCACC
CGCGCTCTCG CCGCCTACGA CAAAGCCCAC GAGCTAGCGC CCAATAACGC AATCGTCATC
GCCAACGCCG CCAATGCCGC CATCGAAGCT CGCCAGTTCC CGCTCGCCGG ACGCTGGATC
GCGATGGCCA CGGGCGAGAT GGCTGACGAG CCACACGTGC TCGTCGAAAA AGAACGCTAT
CTCTTCCACA GCGGCAAGTA TCAGGAAGCC GCGGTCGCCG GCCAGCGCGC GCTGGAAAAG
CTGCCGAAAG ACCGCAACGC CAGCGTCTAT CTTGCCTACA CGTATTACAA CCTCGGCCGT
TATGACGACG TCCTTGCCCT CAGCGACAAG TACGACAACA TAATTCCGAA GGAACCGAAC
TTCCCGCTCC TCGAAGGCCA CGTGCATCGC CAGTCGCAGC TGACGGACGA AGCCGTACAG
GACTACACCC GTGCTCTCGA ACGCGATCCC AAGATGGTGG AAGCCTACGT CAACCGCGGC
TATGCATTAA ACGATCTGCA GAACGCCGAG CAGGCCGCGC AGGACTTCCA CGCCGCGCTC
CAGCTCAATC CGAACAACGG CACCGCGCAC CTCGGCCTGT CGTTCTCCGA GCTGCAACTG
CATCACGGCA AAGAAGCCCT GGCGGAAGCT GCCGCCGCCG AAAAGATTAT GGGCGAGTCC
GGCGCGACGC ACCTCGCCAC TGCCACCGCG TATCGCCAAC AGCGTCTGAT GGCGCAGGCC
GAGAAGGAAT ACATTGCGGC CATCAAGTTC GCGCCGCAGG ATCCCAAGCT CCACCTGGCG
CTGGCGGAAA CGCAGTACAA CGAGCGCAAG TATCAGCAGT CGCTCAATAC GCTGGCCGAC
GCTCTCACCC TCGATCCCAA CGATCCGCTG ATCTACGCCC AGATGGCGCA TGCTCACGCG
GAGCTTAAGC ATCGTGACGA GACGCTTCGT TACGTAACGC TAGCCGAGCA AACCGGCGGC
GAGAAATCCG CCATCCTGCT CGACACCGGA GAAGCCCTGC TCACCCTCGG CGATCGTGAT
GGCGCGATGA AGCGCTTCGA ACGCGCCCTC GATGCCCCCG ACGCCGACCG CGTCCAGGCC
CGCCTCGCCA TCGCGCGCCT CATGGTCCAC GACGGCAAAA ACGGCGACGC TCGCCAGCAG
GTCGCGCTCG CTTTTGCAGA AAGCCGTATT GGCGAAGCTT CGCCGGTCAC CCCCGACGAT
CTCGTCGAAG CCGCCAACAT TTTCCTCTCG ATCAACGATT TCGATCTCGC ACAGCGCTAC
TTCGTAAAAG CGAAGGACGC CGGCGCTGCC GATGAAGTCG TCGCCATCGG CCTCGCCAAT
GTTGCGCTCG TTCGCGGCAA CACCAACGAA GCCCAGGTCC AGCTCGCTTC CGTCGGAGAT
CCGGCGGAAC AGGCACAGAA CTACGATTAC CAGCTCGCTC TCGGCGATAT GTATCGCCAG
CAGCGCAACG GACAACTGGC CCTCAGCGCC TTCGCGCGCG CTAACCAACT GAGCGGTGCG
GACAACACGA CCGCCGAACG CGCTCTCTTT GAAACCGCCG GTCAGGAGGG CATGCACATC
AACGACAAGT TGAGCCTGCT CTCCGACCTC GACGTCCACG GCATCTTCGA TAACGCGACC
ATCTACAACC TCGATCGCCA GATTTTCGGC GTCGTCGGGA GCCAGCAGCC GATTCCGCCG
CGCTCCACCA CCGAGTCACT CTGGACCAAT GGCTACCGCC TGCACCTCAA TGGGCTCCCG
TTGATCAGTG GTTTCTTCCA GCTTCGTAAT GCTCGCGGTG AGTTCTCCGT GCCCAGCAAC
GCGCTGATCG TTCCCACTGA TACCTACGAT TACAACTTCA ACACCGCAAT CAATCCCACG
CTGAAGATGG GCTTCCTCCG TCTCGACTTC AACGCCGGCG TCCAGTTCAC GGTGCGCCGC
GACAAAGATT CGCCGGTCGT GATGAACCAG AACCTCTTCC GCCAGTTCGT CTACCTGCAG
TCGAATTCCA TCGGCGACTG GCTCCAGATT CGCGGCGAGG CCTATCACGA AGCCGGGCCC
TTCACCGACC GCGACTTGAG CTCGCGCGAC GTCGGCACCC GCCTCGAGTT CGTCGTCGGC
CGGCCATGGG GACGCAATGC CCTCCTCACC GGCTACAGCG CCCGCGACAT TCAGTACAAC
CCGAGCATTC GCGAATTCTT TACCACCAGC ACATATGCCG GTTTGCAACA CACTTTCGGA
CGCGAACGCA GTTTGACTGT CGCCGCGCTC GGCGAATACA TCCGCTCCTG GCGCGTGCAG
GACGACTTCT ACGCCATCGC GCAGGCGATC GAACCCGGCG GCCGAATTAC GTGGCAACCA
AATAATCGCT GGAAGCTAGA TGGAAATTTC GCGTGGGGTA AAGGCGAAGG TTTCGCCTTA
TATGACAACG TGCAGAGCAG TTTCTTCATC TCTTATGTAA AGCCGTTCCG CCGCTCGATG
ACGGATGCGT TTGGGGATGT ACCTGTTGAG TATCCGCTCC GTTTCTCCCT CGGGGTTCAG
ACGGACAACT TTTATCACTT TACTGGCCGC GGACAGACTC AGATTCGACC TGTAATCCGT
CTGACGCTGT TTTAA
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| Protein sequence | MKKSFIYCSL FLSFVVSAAV AQDFEINGGQ QQQTPAPQKA GKKSKGKAAS SAPANGGSNE
IGWGNSIEVG RLARAAQDAL KHGNPAAAAT YAQRAVQAAP QNSKLWLLLG YTSRLAGRNQ
ESINAYNHAI QTDPKSLDAK SGLAQTYMKM GRTDEAKRLL AQVLAAGSTR QNDLLVAGEL
YLRTKDYQQG INYLQRADNL KPNAHAELLM AMGYMKMKQP QKAKQLLDMA KRRAPNNVEI
FQAVATFYRE DHDYKNAIAT LNSAPRKTPA LLADLGFTYE LSGDKQSAAA TYVKAANAAP
KEIKFQLSAA QSLIQSGDKT KAQDFLKRAA AIDPNHYRLH AIRAGLAKSE NRNDEAVKEY
QLALSAMPKE GVPEGQLYPV LLRLNLSEAL KDTGNTEAAK QQVEIAEQEI SKINVEGPAK
AEFLRVRASI KASGEDYAGA EADLKEAQKL DPDNQLITLQ YANLLWKAGR KDESKQMYLG
ILQGDPKNRY ALEALGYLAR DVGDTAGAEH YFTALAQAYP DDYIAYLALG DLYTATRDFT
RALAAYDKAH ELAPNNAIVI ANAANAAIEA RQFPLAGRWI AMATGEMADE PHVLVEKERY
LFHSGKYQEA AVAGQRALEK LPKDRNASVY LAYTYYNLGR YDDVLALSDK YDNIIPKEPN
FPLLEGHVHR QSQLTDEAVQ DYTRALERDP KMVEAYVNRG YALNDLQNAE QAAQDFHAAL
QLNPNNGTAH LGLSFSELQL HHGKEALAEA AAAEKIMGES GATHLATATA YRQQRLMAQA
EKEYIAAIKF APQDPKLHLA LAETQYNERK YQQSLNTLAD ALTLDPNDPL IYAQMAHAHA
ELKHRDETLR YVTLAEQTGG EKSAILLDTG EALLTLGDRD GAMKRFERAL DAPDADRVQA
RLAIARLMVH DGKNGDARQQ VALAFAESRI GEASPVTPDD LVEAANIFLS INDFDLAQRY
FVKAKDAGAA DEVVAIGLAN VALVRGNTNE AQVQLASVGD PAEQAQNYDY QLALGDMYRQ
QRNGQLALSA FARANQLSGA DNTTAERALF ETAGQEGMHI NDKLSLLSDL DVHGIFDNAT
IYNLDRQIFG VVGSQQPIPP RSTTESLWTN GYRLHLNGLP LISGFFQLRN ARGEFSVPSN
ALIVPTDTYD YNFNTAINPT LKMGFLRLDF NAGVQFTVRR DKDSPVVMNQ NLFRQFVYLQ
SNSIGDWLQI RGEAYHEAGP FTDRDLSSRD VGTRLEFVVG RPWGRNALLT GYSARDIQYN
PSIREFFTTS TYAGLQHTFG RERSLTVAAL GEYIRSWRVQ DDFYAIAQAI EPGGRITWQP
NNRWKLDGNF AWGKGEGFAL YDNVQSSFFI SYVKPFRRSM TDAFGDVPVE YPLRFSLGVQ
TDNFYHFTGR GQTQIRPVIR LTLF
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