Gene Acid345_4394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4394 
Symbol 
ID4073300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5218093 
End bp5218452 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content61% 
IMG OID637986427 
ProductPadR family transcriptional regulator 
Protein accessionYP_593468 
Protein GI94971420 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID[TIGR03433] transcriptional regulator, Acidobacterial, PadR-family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCG ATAAATCCGC CAACAACGAA ATGCTGAAGG GCACGCTGGA CATGCTGGTG 
CTGCGCACCC TGCTGAGCGG CGATGCGCAT GGGCACACCA TCGCGAAGGT GATCGAGCGT
ACGTCGGACG ATGTGCTCGA GGTGGAAGAA GGGTCGCTGT ATCCGGCGCT GCACCGGCTT
GAAGACCGCG GGTGGGTATC GTCGTATTGG GGCACGAGCG AGAACAATCG TAAGGCGAAG
TATTACCGGC TGACTGCGGC GGGCAAGCGG CAGCTTCACT CGGAAGTGAG CCGCTGGAAG
CAGATGGCGA AGGCCATCGC CAACGTGCTG GGCGAAAAGC AGGCGGAGGT GGAAGAATGA
 
Protein sequence
MAPDKSANNE MLKGTLDMLV LRTLLSGDAH GHTIAKVIER TSDDVLEVEE GSLYPALHRL 
EDRGWVSSYW GTSENNRKAK YYRLTAAGKR QLHSEVSRWK QMAKAIANVL GEKQAEVEE