| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4387 |
|---|
| Symbol | |
|---|
| ID | 4073293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5200767 |
|---|
| End bp | 5202275 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637986420 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_593461 |
|---|
| Protein GI | 94971413 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT CAATCCTCTT CGCGTTCCTT GCGTGCGTCT GCGCAGCATA TGGCCAGCCG
AACACATCTT TCTACGTTGC GACGACCGGG AAGGATTCAA ATGCCGGCAC GCAAGCAGCG
CCGTGGCGCA CCATTCAACA TGCCGCAGAC ACGGCGCGCG CGGGCAGTAC CGTCAACGTG
CGCGGCGGAA CCTACGAAGA GCTGGTGAGC CTCCACGCAT CCGGCAACGC CAGCGATGGT
TTCATCACGT TTCGAAGTTA TCCCGGCGAG GCGGCGATCC TCGAGGCCGA GCACATCACG
CCGCCCGGAA GGACCGGCGT ACTGACGATT CACGACCAGA GTTATGTGCG GGTCGAAGGC
TTTGAGATTC GCAACTTCCG CACCGCCGAG CATGACCTCG CTCCGCTAGG CATCGACGTA
ATGGGCGCGG GCTCTCACAT CGAGCTGCTG AAGAACAACG TCCACCACAT TCAGCAGACA
TTTGAAGGGC GCGATGGTCC GGGGCACGGC GCCAACGCGT TTGGCATTGC GGTGTACGGA
ACCAGCGCCA AAACTCCGAT CACGGATTTG GTCATCGATG GCAACGAGGT GCATCACCTC
AAGACCGGTT CGAGCGAGTC GGTGGTGGTG AACGGGAACG TCACCAACTT CCGCATCACG
CACAACGTTG TGCACGACAA CAACAACATT GGCATCGACG TCATCGGTTT CGAGCATACC
GCGCCCGACC CGGCGGTGGA CCAGGCGCGC GACGGGCTCG TCAGTGGCAA CTTGGTTTAC
AACATCACCT CGAAGGGCAA TCCCGCTTAC CGTAACGATG AATCTTCCGA CGGCATTTAC
GTGGACGGCG GCACCCGGAT CCTTATCGAA CACAACGTAG TTCACGATGT GGACTTCGGC
ATCGAGCTGG CGAGTGAGCA CAAGGACCGC GCCACCAGCT ACGTCATCGC GCGCAACAAT
CTCGTCTATC ACAACCACAC CGCCGGTGTT TCCATCGGCG GCTACGATCC GCAGCGCGGA
CACACCGAGC ACTGCACGGT GATCAACAAC ACGCTCTACG ACGACGACAC CTCGGCCACC
GGCTCCGGTG AGTTCCAGAT GCAATGGAAC ATGGCAGACA ATATTTTCGC GAATAACATC
GTGTACGCCG GGCCGCAGTG CCTGATGACG ATTCTCAAAA CTGAAGTCAA GCCCGGCCAA
CCGCCCGCGA ATATCGATCA CAACCTCTAT TACTGCGCTT CCGGTGCCAA GGCGAGCACG
TGGAAAAACA CTGCCGCCAC TGTGACGGGA TTTGAAGAGT ACTCGCAGGC CAGCGGCAAT
GACCGCAATT CGCATTTTCA GGATCCCCAT TTTGTCGACG CTGCCGCGAA GGACTTCCAC
CTGCAGCCAG ACTCTAAGGC CATCGCCGCA GGAGCCATTG ACGGAATGCC GGTGGGAGCA
CTGGATCTTG ACGGCTCGCC GCGGACGAAA TCTGGCAACA TCGACATCGG CTGCTACCAA
CGAAAATAG
|
|---|
| Protein sequence | MKISILFAFL ACVCAAYGQP NTSFYVATTG KDSNAGTQAA PWRTIQHAAD TARAGSTVNV
RGGTYEELVS LHASGNASDG FITFRSYPGE AAILEAEHIT PPGRTGVLTI HDQSYVRVEG
FEIRNFRTAE HDLAPLGIDV MGAGSHIELL KNNVHHIQQT FEGRDGPGHG ANAFGIAVYG
TSAKTPITDL VIDGNEVHHL KTGSSESVVV NGNVTNFRIT HNVVHDNNNI GIDVIGFEHT
APDPAVDQAR DGLVSGNLVY NITSKGNPAY RNDESSDGIY VDGGTRILIE HNVVHDVDFG
IELASEHKDR ATSYVIARNN LVYHNHTAGV SIGGYDPQRG HTEHCTVINN TLYDDDTSAT
GSGEFQMQWN MADNIFANNI VYAGPQCLMT ILKTEVKPGQ PPANIDHNLY YCASGAKAST
WKNTAATVTG FEEYSQASGN DRNSHFQDPH FVDAAAKDFH LQPDSKAIAA GAIDGMPVGA
LDLDGSPRTK SGNIDIGCYQ RK
|
|---|
| |