Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4341 |
Symbol | |
ID | 4071759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5150816 |
End bp | 5151106 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637986374 |
Product | host factor Hfq |
Protein accession | YP_593415 |
Protein GI | 94971367 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.118221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA AGCCCGCACA GAATATCCAG GATTCGTTTC TCAACACAGC CCGCAAGGAC AAAACGATTG TCACGATTTA CCTGCTTAGC GGCGTGAAGC TGACGGGCAG GATCCGTTCT TTTGACAAGT ATTCGGTCGT CCTGGATACC AACAACCAAG AACAACTGAT TTTCAAGCAC GCGATTTCGA CGGTGGTGTT GCCGCGGCCG GCCCATGGCG CGGATGTGCG GCACTCCGAT GCGAAGCCGG TAGGCACAAC CAGCCCGGCG ACCCAAACGA CGGAGGGTTA G
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Protein sequence | MENKPAQNIQ DSFLNTARKD KTIVTIYLLS GVKLTGRIRS FDKYSVVLDT NNQEQLIFKH AISTVVLPRP AHGADVRHSD AKPVGTTSPA TQTTEG
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