| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4277 |
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| Symbol | |
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| ID | 4071850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5082952 |
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| End bp | 5084358 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637986310 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_593351 |
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| Protein GI | 94971303 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0190966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCT CTGCCTGCTT GTTGTTGCTC CTCTCGCTAG GATCGCTATC GCTGTCCGCC
GAAACCATCG TGCTCAAGAA TGGCCGCAAG ATCCTCGTCG ACTCCGTTCG CGAAGAGAAA
GACAAAGTCC TCTACGAGAT TGGTGACTCC AGCTACGCCA TCCCCAAATC CTCGGTCGAT
CACATTGACG CGTTCGGATC TCCATTGTCA TCGCACGGGC CTGCTGCCGC CCCCGAATTC
GTCCCACAAA CTGCCACTCC CGTCTTCGGA GCCGCGGCCG AAGTGCATGT CATCAAGAAC
GACCGCATTG ACGACGTGGC CATTGCGGAT GCCGAGCGCA ATGGCGATGC CGCAACCGCT
GCCGCCGCTA ACTTCATGGC CGGACGCTTT GCCCTGGAAC AAGGTGATCG AGATGCTGCC
GCCCGCTACT TTGACCGCGC TCTGCGCTTC AAGTCCGACG ATGCCAACGT TCTGATCAAC
TACGCCGCCG TGCTTGTCCG CACCGGACGC CCACAGGAAG CACTGCCGCT GGCCGAGCGT
GCCGTTCGCG CCGCGCCAGA TTCGCCCGAC GCCTGGGCCG TGCTCGGCTA CGCCAACCTC
CAGGCCGATC GCTCCAAGGA CGCGATCCCG GCATTCGAGA AGTCTCTTAA GCTCCGTCCC
GACCCGACCG TCGAAGCCTT CCTCAAGCGC GCGCATAAGG AAACCACGAC GGAAGCCGAC
TACACTGCCG CCGAGAGCAG CCACTTCACC CTGCGCTTCG AGGGAAAGGC CTCGCAGAAC
GGCCTTCCCC GCGACATCCT CGAGCAGCTC GACTCCGATT ACGACGGCCT CGTCAGCCAA
CTCGGCGTCG CCCCCCACGG CAGCATCACG GTCATCCTTT ATACCGAGCA GGCATTCTTT
GACGTCACCC AGGCTCCGTC TTGGTCCGGC GCCATCAACG ACGGTAAGCT CCGCATCCCG
ATCAGCGGCG TCTCGCAGAT GACCAGCGAA CTGGCGCGCG TGCTCCGTCA CGAGCTCACT
CATTCGTTCA TCACCCAGAT CGCCCGCGGA CGCTGCCCCT ACTGGCTCAA CGAGGGTGTG
GCGCAGCTCA TGGAACCGAA AAGCATCTCC AGCGCGGGAC CACTGCTCGC CAAGCTTTAT
GCCAGCCAAA GGGAGATCCC GCTCAACGCG CTCGAAGGCT CGTTCATGGG TCTGGACGGT
AATTCTGCCG CCATCGCTTA TGCCGAATCA CTCACTGCCG TCGAATACAT TAATGATACG
TACGGCATGA GCGACGTCCG GCGTCTCCTG GAACGAATCG GGGAAGGCTC ATCCACGGAA
GCCGCGTTGC GCAGCACCTT CAATGTGGGT TATGGGCAGT TCGAGGAAGA CATCGCGACC
TACCTCAAGA GCAAGTACGG ACAATAA
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| Protein sequence | MRFSACLLLL LSLGSLSLSA ETIVLKNGRK ILVDSVREEK DKVLYEIGDS SYAIPKSSVD
HIDAFGSPLS SHGPAAAPEF VPQTATPVFG AAAEVHVIKN DRIDDVAIAD AERNGDAATA
AAANFMAGRF ALEQGDRDAA ARYFDRALRF KSDDANVLIN YAAVLVRTGR PQEALPLAER
AVRAAPDSPD AWAVLGYANL QADRSKDAIP AFEKSLKLRP DPTVEAFLKR AHKETTTEAD
YTAAESSHFT LRFEGKASQN GLPRDILEQL DSDYDGLVSQ LGVAPHGSIT VILYTEQAFF
DVTQAPSWSG AINDGKLRIP ISGVSQMTSE LARVLRHELT HSFITQIARG RCPYWLNEGV
AQLMEPKSIS SAGPLLAKLY ASQREIPLNA LEGSFMGLDG NSAAIAYAES LTAVEYINDT
YGMSDVRRLL ERIGEGSSTE AALRSTFNVG YGQFEEDIAT YLKSKYGQ
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