| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4264 |
|---|
| Symbol | |
|---|
| ID | 4073191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5066200 |
|---|
| End bp | 5067726 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637986296 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_593338 |
|---|
| Protein GI | 94971290 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCCAG TTATAGACCT TTTCGCCGGG CCGGGCGGTC TGGGCGAGGG CTTTTCCGCC
CTCCGAGATG ATGCAGGGCG CCGTGTCTTC AGGATCGGCC TTTCCATCGA GAAAGATCCT
GCTGCGCACA AAACCCTGTT GCTCCGAAGT TTTTTTCGGC AGTTCGAGAT TGCACCGAAC
CAGTACTACA GCTACGTTCG TGGGGAGTTG GCGATTAGCC AGTTGATCGA GGCCTTCCCA
ACCCAATACG GCTCGGCCCA GGAAGAGGCA CTCTGCGTTG AATTAGGGAA GCACGACTGG
ACCGACATTG ACAGTCGTAT CCGGAGAGCG ATCGGCGACT TCAAGAATTG GGTCCTGATC
GGAGGACCTC CGTGCCAGGC GTATTCACTT GTGGGCCGAT CGCGAATGCG CAATAAGAAC
CCGCAGAAAT TCGGCAGGGA CAAGCGTCAT TTGCTGTATC GCGAGTATCT TCGAATTCTC
GCGGTGCACC GGCCACCCGT CTTCGTGATG GAAAACGTGA AAGGCATTTT GTCCTCTCAG
CACAAGAAAG AACCGATCAT CAATAAGATC ATTGCTGACC TGAAACACCC ACTTGACTCT
CTTCCCGAGC TGAAGACCTC TGAATGGGAC TCGGTCACCT ACGACATTCA GTCACTCGTC
GATCGCGTTG ACTCAAGGCA GAGCAGCCTT TTCGGTAAGT CCCCGCGGGA TTTCGTGATT
CGATTTGAAC AGCATGGGAT ACCCCAAGCT CGGCACCGCG TTCTTCTGGT TGGAATACGT
TCGGACATCT CTCGCGATCT CTCGACGTTA ACGCCACAAA AGCAGATCGC AATGTGGAAT
GCAGTTCAGG ACTTGCCTGA AATGAGGAGC CGATTGTCCG GGGAGCCCGA TTCGCCCGAG
GCGTGGCTTC GCGCCATTGG AATGATTCGT GATTCGCTGG GGAAAACCTC TTGCGGCAGT
CAGTTGCGAG ATTTCATCCA CAAGAGTTTG GGACAATTGA CGGCTCGCCA AAGCTGCGGA
GGTGAATTCA TGGAATGGCG ACGGAGGTCG GAGTGGGCTT CAGATTGGTT TCACGATGCG
CGACTCGGCG GGGTTTTGAA TCACACCTCT CGGGGCCATA TCGCATCCGA TTTGCAGAGG
TACTTCTTCG CGGCCTGTTT TGCCAAGGTA AGGAATCGCT CCCCGAAAAT TGAGGACTTC
CCGATTGCTT TATTGCCCAA GCATAAAAAC ATCAAGAAGA AGAACACCAA AGCGACGATT
TTTGCAGACA GATTTCGGGT TCAGATTGCT AGCCGCCCCG CGACAACTAT CACATCACAC
ATCAGCAAAG ACGGCCATTA CTTCATCCAC CCTGACCCGT TACAAGCGCG AAGCTTGACG
GTGCGAGAGG CGGCACGCCT TCAAACGTTC CCAGATAACT ACTATTTTGA AGGCCCGCGC
ACGTCCCAGT ACCACCAAGT TGGAAACGCT GTACCGCCCT TGATAGCTCG CGAGGTTGCA
AAGATGGTCG CCGACCTTTT GGGGTGA
|
|---|
| Protein sequence | MIPVIDLFAG PGGLGEGFSA LRDDAGRRVF RIGLSIEKDP AAHKTLLLRS FFRQFEIAPN
QYYSYVRGEL AISQLIEAFP TQYGSAQEEA LCVELGKHDW TDIDSRIRRA IGDFKNWVLI
GGPPCQAYSL VGRSRMRNKN PQKFGRDKRH LLYREYLRIL AVHRPPVFVM ENVKGILSSQ
HKKEPIINKI IADLKHPLDS LPELKTSEWD SVTYDIQSLV DRVDSRQSSL FGKSPRDFVI
RFEQHGIPQA RHRVLLVGIR SDISRDLSTL TPQKQIAMWN AVQDLPEMRS RLSGEPDSPE
AWLRAIGMIR DSLGKTSCGS QLRDFIHKSL GQLTARQSCG GEFMEWRRRS EWASDWFHDA
RLGGVLNHTS RGHIASDLQR YFFAACFAKV RNRSPKIEDF PIALLPKHKN IKKKNTKATI
FADRFRVQIA SRPATTITSH ISKDGHYFIH PDPLQARSLT VREAARLQTF PDNYYFEGPR
TSQYHQVGNA VPPLIAREVA KMVADLLG
|
|---|
| |