Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4234 |
Symbol | |
ID | 4073160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5019418 |
End bp | 5020827 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637986265 |
Product | transcriptional regulatory protein-like |
Protein accession | YP_593308 |
Protein GI | 94971260 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TCATCGGGCC AAACCGTCTT CGCTTCGGCC CATATGAGGC CGATCTGCAC ACCCGCGAAC TCTGGAAGTT CGGGACCCGC GTGAAGCTGG TTGGCCAGCC CTTTGACATT CTTGAGCTCC TTATCTCCCG CCCGGGGGAA TTGGTCACTC GCGACGAACT TCGCGAGCGG CTCTGGCCGA AAGAGACTTT CGTTGATTTC AACCACGGTC TGAACGCAGC AGTGAACAAG CTGCGCGACG TACTCTGCGA TTCGGCCGAC GATCCTAAGT TCATCGAGAC TCTTCCGCGG CGTGGTTATC GATTTATTTC CAAGGTTGAA CGGGGTGTCG AGGAGCCGAT ACCGGTCGCT GAAACTTCAC CGCCGACTCC GTTGGTTGTG CCAACCCCGG CTGAACTGGC CCCCGAGCCT CGGTACGAAT CGCCTGCGAT CACTGTGGAA AGATCGTTAG GGCGCACCAA GTGGTCGTGG GGGGCGGCGG CTCTATTGAT GGTCGTGATT GCGTTTATCG CGTTCCTCGC CATCTCCAAA ATCAGCCGTG AGCCCAGTGA GAGCGAGAAG AAGGCATCAA TGGGTGGGCA GGGCGCCGCA ATTGCAGGCT TGGTGAAAGG CGTACAGGTA ACGCTCGTGA CCGGCGGCAA AAATGAAGGA CCCCAATTCT CGCCGGATGG AAAGCGCCTG ACTTTTATGT CGAACCGGAA CGGTGCGACC GATGTCTGGA TAGCGAATGC GAGTGGAAGC GATCCGCATC CACTTACGAC GCTGGGCGAT GCCGGAACTC CAAGGTGGTC ACCCGACGGG CAGACCATCG CGTTCGATTC ACACATCCAT AAGTACTCGG CAATTCTCAC TATACCCGCC GATGGCGGCG CCCCTCGCGT ATTGATCGCC GGCGATTCCA ATAACAGCGT GCCGAGTTGG TCGAAGGACG GTCACTTCAT CTACTTTGCT TCCGATCGGA CTGGACGATT CGAGGTGTGG CGGGTACCCA CCACAGGCGG CCCGGCACAA CAGATCACCC AGGACGGTGG GTTCGCGCCC GTGGAATCCG CCGACGGAAA ACTGTTGTTC TATGCCAAGA ACCAGTTTCC CAACCCCGAG GTGTGGGAGG TCTCGCTGGA GGGCGGCGGA GTGGAAGCGC CTTTGAGGCC GATTATCCGT CCGGTCACCT GGGCAACATG GGCCGTAGCC GGCGATTCTG TCTTCTATGT GGAAGAAGGG CCGGGAAACA TTGCGATGCT GAGCGTTGTA GAACCGAAAG CGCGGCGAAT GCGTCAGGTC ACAGTGCTTG GACGCTTTCC GTTCTGGCTG GCGATAAGCC CCGACGGCAG GAAGTTGGCC TTCGATCGCA CCGACTCCGA ATCCACCACG AGTATTGTGG CACTGGAAGA TTTCGAATAG
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Protein sequence | MTDLIGPNRL RFGPYEADLH TRELWKFGTR VKLVGQPFDI LELLISRPGE LVTRDELRER LWPKETFVDF NHGLNAAVNK LRDVLCDSAD DPKFIETLPR RGYRFISKVE RGVEEPIPVA ETSPPTPLVV PTPAELAPEP RYESPAITVE RSLGRTKWSW GAAALLMVVI AFIAFLAISK ISREPSESEK KASMGGQGAA IAGLVKGVQV TLVTGGKNEG PQFSPDGKRL TFMSNRNGAT DVWIANASGS DPHPLTTLGD AGTPRWSPDG QTIAFDSHIH KYSAILTIPA DGGAPRVLIA GDSNNSVPSW SKDGHFIYFA SDRTGRFEVW RVPTTGGPAQ QITQDGGFAP VESADGKLLF YAKNQFPNPE VWEVSLEGGG VEAPLRPIIR PVTWATWAVA GDSVFYVEEG PGNIAMLSVV EPKARRMRQV TVLGRFPFWL AISPDGRKLA FDRTDSESTT SIVALEDFE
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