Gene Acid345_4207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4207 
Symbol 
ID4072166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4985011 
End bp4985748 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content57% 
IMG OID637986238 
Producthypothetical protein 
Protein accessionYP_593281 
Protein GI94971233 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.11764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0098073 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCAG CCTCGTATAT CGCATCGCAT TTGCGCACCG TGTTGAAAAA TGGCGGTTCG 
GCGCCGCACA CGAAAGAAGT GGAGTGGTTC TTTAAGCATG AGGTGAAATC GCGCGGGTGG
TATACACAAG AGATCCGTAA GGTGGCTCGG CGATTCACCA AAGTTCTCAA GCACGATGCT
GGATTGCCGT ATTTGATTGA AGTCGCCGAC CAGTTGTTCC AAGGGGAAGT GCTCGAGGAA
AAGGTGCTGG CGGTATTGCT GCTGGAGCGC GAGACCGCAG CCTTCGGCGA TCGTGAGTTT
CGCCTATTCG AAAAGTGGTT GGATCGCATC GGCTCCTGGG CCGACCACGA TGGAGTGGTG
CACTCTCTCA TTGCACCGAT GCTGGTCGGC GATCCCAAGC GACAAGAGCG CGCGTTTAAG
TGGGCGCGTT CAAAAGACCG TTGGCACCGC CGTGCAACCG CGGTTTCGCT GATTCGAGTT
GCGCGGGCGA AACAATCGTT TGCCCAGATT CAACGCGTGA CGGAAGCGCT GCTCGGCGAC
GAAGACGACA TGGTGCAGAA GGGCCTTGGC TGGCTTCTGC GCGAGACGGC GAAGGCCGAC
CCCAAGACCA CGATTCCCTA CCTGATGAAG ATCCGAGAAC GAGCACCACG CCTGGTGCTG
CGGACCGCTT GTGAGAAGCT CAGTTCGAAG GATCGCGCCC GTATCTTAGC CAAGTCTACG
GCCCGAACGG TACAATAG
 
Protein sequence
MKPASYIASH LRTVLKNGGS APHTKEVEWF FKHEVKSRGW YTQEIRKVAR RFTKVLKHDA 
GLPYLIEVAD QLFQGEVLEE KVLAVLLLER ETAAFGDREF RLFEKWLDRI GSWADHDGVV
HSLIAPMLVG DPKRQERAFK WARSKDRWHR RATAVSLIRV ARAKQSFAQI QRVTEALLGD
EDDMVQKGLG WLLRETAKAD PKTTIPYLMK IRERAPRLVL RTACEKLSSK DRARILAKST
ARTVQ