Gene Acid345_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4192 
Symbol 
ID4072151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4964474 
End bp4964833 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content65% 
IMG OID637986223 
Productalkylhydroperoxidase AhpD 
Protein accessionYP_593266 
Protein GI94971218 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.222216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATT GGAACCAATA CCAGAAGGAA CTTGGCGCCC GCCTTAAGGA GCTCTCGGGA 
CTCAGCCCCG ACACCCTGAA AGGCTACATG ACGCTGAGCG GCGCCAACAA GGAAACGACC
CATCTCGGGG AGAAGACGCG CCAGCTCATC AGCCTGGCCG TCGCCGTCAC CACCCGCTGC
GACGGTTGCA TCGTCTTCCA CACCGAGGCC GCCATCAAGG CCGGCGCCAC CAAGGAGGAG
ATCTCCGAAG CGCTCGGCGT CGCGGTAGGC ATGAATGCCG GGGCCGCCCT GATCTACAGC
ACCCGTGTCC TCGACGCCTA CGCCGCAAAG ACAGAGCACG CCGCCACCAC CGCGGGCTAA
 
Protein sequence
MLDWNQYQKE LGARLKELSG LSPDTLKGYM TLSGANKETT HLGEKTRQLI SLAVAVTTRC 
DGCIVFHTEA AIKAGATKEE ISEALGVAVG MNAGAALIYS TRVLDAYAAK TEHAATTAG