Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4192 |
Symbol | |
ID | 4072151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4964474 |
End bp | 4964833 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637986223 |
Product | alkylhydroperoxidase AhpD |
Protein accession | YP_593266 |
Protein GI | 94971218 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.222216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATT GGAACCAATA CCAGAAGGAA CTTGGCGCCC GCCTTAAGGA GCTCTCGGGA CTCAGCCCCG ACACCCTGAA AGGCTACATG ACGCTGAGCG GCGCCAACAA GGAAACGACC CATCTCGGGG AGAAGACGCG CCAGCTCATC AGCCTGGCCG TCGCCGTCAC CACCCGCTGC GACGGTTGCA TCGTCTTCCA CACCGAGGCC GCCATCAAGG CCGGCGCCAC CAAGGAGGAG ATCTCCGAAG CGCTCGGCGT CGCGGTAGGC ATGAATGCCG GGGCCGCCCT GATCTACAGC ACCCGTGTCC TCGACGCCTA CGCCGCAAAG ACAGAGCACG CCGCCACCAC CGCGGGCTAA
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Protein sequence | MLDWNQYQKE LGARLKELSG LSPDTLKGYM TLSGANKETT HLGEKTRQLI SLAVAVTTRC DGCIVFHTEA AIKAGATKEE ISEALGVAVG MNAGAALIYS TRVLDAYAAK TEHAATTAG
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