| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4042 |
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| Symbol | |
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| ID | 4072463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4775613 |
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| End bp | 4776659 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637986072 |
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| Product | isocitrate dehydrogenase (NAD+) |
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| Protein accession | YP_593116 |
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| Protein GI | 94971068 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACA AGATCACACT CATTCCCGGC GACGGCATCG GCCCTGAAGT CACCTCCGCT
GCCGTGCGCG TCCTCGAAGC CACCGGACTC AAGTTCGAGT GGGAAAGCTT CGCCGCCGGC
GCCGAGGCCT ACGAAAAATA CAAGGAATAC ATCCCGAAAG AACTGAACGA ATCCATCGAG
CGCACCAGGA TCGGCCTCAA GGGTCCAGTC ACCACTCCGA TCGGTGGCGG ATTCTCCAGC
ATCAACGTTG AACTGCGCAA GCGCTTCGAG CTCTACGCGA ACGTCCGGCC AATCCGCAAT
CTTCCAGGCG TGCACACTCG TTATCCCGGC GTCGATCTCG TCGTGGTGCG CGAGAACACC
GAAGGCCTCT ACTCCGGCAT CGAGCACGAA GTTGTCCCCG GCGTAGTCGA GAGCCTGAAG
ATCATCACCG AGAAGGCCAG CACCCGCATC TCCAAGTTCG CGTTCAACTA CGCGCGCAAG
ATGGGCCGCA AGAAGATCCA CTCCATCCAC AAAGCCAACA TCATGAAGAT GTCCGATGGC
CTCTTCATCC GCTGCTCGCG CAACATCTCG AAGGAATATC CCGAGATCAT CTACGGCGAG
CACATTGTGG ACAACACCTG CATGCAACTG GTGATGAACC CCTACCAGTA CGACATCCTG
CTCCTCGAAA ATCTCTATGG CGACATTGTC AGTGACCTCT GCGCCGGATT AGTCGGCGGC
CTCGGCCTCG CTCCCGGCGC CAACATCGGC GAACGCGCGA GCATCTTTGA AGCCGTTCAC
GGCTCCGCTC CCGACATCGC GGGCAAGAAC ATCGCCAATC CCACGGCTGT CATCCGCAGC
GGCATCCTCA TGCTCCGCCA CCTCGACGAG CAGGACGCCG CCAACCGCGT CAAAGCCGCC
GTCCACCACG TCTACCGCGA AGGCAAACAC CTCACCAGGG ACATGGGTGG CACTACGTCC
ACCAGCGAAT TCGCCGATAA AGTCGTCGAG GCCATCCACA GCAAAGACCT CGTCGTCCCC
GCACCGCCGG TACAAAGTCC AGCGTAA
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| Protein sequence | MTYKITLIPG DGIGPEVTSA AVRVLEATGL KFEWESFAAG AEAYEKYKEY IPKELNESIE
RTRIGLKGPV TTPIGGGFSS INVELRKRFE LYANVRPIRN LPGVHTRYPG VDLVVVRENT
EGLYSGIEHE VVPGVVESLK IITEKASTRI SKFAFNYARK MGRKKIHSIH KANIMKMSDG
LFIRCSRNIS KEYPEIIYGE HIVDNTCMQL VMNPYQYDIL LLENLYGDIV SDLCAGLVGG
LGLAPGANIG ERASIFEAVH GSAPDIAGKN IANPTAVIRS GILMLRHLDE QDAANRVKAA
VHHVYREGKH LTRDMGGTTS TSEFADKVVE AIHSKDLVVP APPVQSPA
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