Gene Acid345_4041 details

Gene Information

• Locus tag: Acid345_4041
• Symbol: nrdR
• ID: 4072462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: +
• Start bp: 4775096
• End bp: 4775587
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637986071
• Product: transcriptional regulator NrdR
• Protein accession: YP_593115
• Protein GI: 94971067
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCTGCC CATTTTGCGC CCATCCCGAA GACAAGGTGG TGGACTCGCG CGAGAGCAAA 
GAAGGCGAAT CCATTCGCCG ACGCCGCGAG TGCCTGAAGT GCGAAAAGCG CTTCACCACC 
TACGAGCGCA TTGACGAAAT CCCCTACATG GTCGTCAAAA AAGACGGCCG CCGCGAGCGC 
TTCGACCGCC AAAAAGTTCT CAATGGCCTG ATGCGCGCCT GCGAAAAGCG TCCCGTCTCC 
ATCGGCAAGC TCGAAGCCAT CGTCAACGAA GCCGAAACCT TCGTCATCGA TTCCCCCGAA 
CGCGAACGCC GCACCAGCGA AATCGGCCAA CTCATCATGG AGCACCTCAA GAAGTACGAC 
AAAGTGGCCT ACGTGCGCTT CGCTTCCGTC TATCTCGATT TCAAAGATGT CCGCGAGTTC 
CTCTCCGAAC TCCAGGACCT GCTGAACCAC AAAGATCCAG CGGCCGTCGC GACGGTCAAG 
CCCATCAAGT AA 

 

Protein sequence

MRCPFCAHPE DKVVDSRESK EGESIRRRRE CLKCEKRFTT YERIDEIPYM VVKKDGRRER 
FDRQKVLNGL MRACEKRPVS IGKLEAIVNE AETFVIDSPE RERRTSEIGQ LIMEHLKKYD 
KVAYVRFASV YLDFKDVREF LSELQDLLNH KDPAAVATVK PIK