Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3932 |
Symbol | |
ID | 4071315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4646846 |
End bp | 4648012 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985958 |
Product | response regulator receiver modulated serine phosphatase |
Protein accession | YP_593006 |
Protein GI | 94970958 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.380742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCAA CTTCCAGTTC CGCCGAAACC CGCGCTGCGC TTGCCGCTTC CGCCCGCATC CTCATTGGTG AGGACCAGCA GGACGTGCAG GACGCCCTTC ATATTCTGTT GAAAGGCGCG GGCTATGCGG CTGAGTCGGC GTCTACTCCC GACGCGATCC TGAGCAAGCT GGAGTCCGGT AAGTACGATC TCCTTTTGAT GGATTTGAAC TATCGCCGGG ACACTACGTC CGGTAGCGAA GGTCTTGAGA TTCTCGGCAT CCTGCGCAAT ATGCCCGCAC CGCCACCCGT GATCGTGATG ACAGCGTGGG GCAGCATCGA ACTCGCCGTG CAGGCCATGC ACATGGGCGC GCGTGACTTC ATCCAGAAGC CCTGGGACAA CAATCATCTT CTACATCTCG CGGAGAAGCA CATCAGTGCG CACCGCGACG AAACCCTCCG CAAATTCAAA CAGGATCACG AACTCGCCGA AGCGCAGGCC GTCCAGAAGC GGCTCATGCC CGCGACTCTG CCAAAGATCT CCGGGATTGA TATTGCCGGA CAGTGCCAGC CCGCAGGCGC CGTCGCCGGA GACTACTTCG ACGTGCTCCA GCTCGGCGAC AACCTCGGCA TCTGTATTGC CGACGTCATC GGCAAAGGCC TGCCCGCAGC TCTCATGATG AGCAATCTCC AGGCCGCGGT AAAGGTTACC GCCGCCGACT GGGTGAAGCC CTCGGAGCTT TGCAAGCGCG TGAACGCACT CGCCTGCCGC AACGGCGCTG TGGACAAGTT CATCTCGTTC TTCTACGCAG TGTACGAGCC TGCGACGCGC AATCTCATGT ACACGAATGC TGGCCACAAT CCGCCGATGG TCATCCGCAG CAACGGTGAA TGCCTGCGCC TCGACACGCC CGACGTCGTT CTCGGCCAGA TTTCGGATTG GCAATACCAG GACGCGCACT TCCAGCTCGA GCCCGGCGAC AAGCTCGTGC TCTACACCGA CGGCATGAAC GAAGCCGGCG AACAAGATGG CAACGAGTTC GGCGAGGAAC GTTTGAGCGC GTTCTTCCAG CAGCGACCGG CCGCGCGCGC GTCCGAACTA TTGCCTGAGG TGTTCGCGGC AATTACCGAA CACTGCCACA ACAACTTCGC CGACGACGCC ACATGTTTGA TTTTGTCCGT GGATTAA
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Protein sequence | MASTSSSAET RAALAASARI LIGEDQQDVQ DALHILLKGA GYAAESASTP DAILSKLESG KYDLLLMDLN YRRDTTSGSE GLEILGILRN MPAPPPVIVM TAWGSIELAV QAMHMGARDF IQKPWDNNHL LHLAEKHISA HRDETLRKFK QDHELAEAQA VQKRLMPATL PKISGIDIAG QCQPAGAVAG DYFDVLQLGD NLGICIADVI GKGLPAALMM SNLQAAVKVT AADWVKPSEL CKRVNALACR NGAVDKFISF FYAVYEPATR NLMYTNAGHN PPMVIRSNGE CLRLDTPDVV LGQISDWQYQ DAHFQLEPGD KLVLYTDGMN EAGEQDGNEF GEERLSAFFQ QRPAARASEL LPEVFAAITE HCHNNFADDA TCLILSVD
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