Gene Acid345_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3897 
Symbol 
ID4072232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4612612 
End bp4613553 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content57% 
IMG OID637985921 
ProductNmrA-like 
Protein accessionYP_592971 
Protein GI94970923 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0125783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0358885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG AGACAAAGCC CGCACATCTC GACAGCAAGG AGAAAAACCC CATGAAGATT 
GTAGTTACCA CTCCTACCGG CCACATCGGC AACAAACTGG CCAACATACT TCTTGACCGC
AAATCTGATG TCACGCTGAT AGCGCGACAT CCGGAGAAAG TAAAGGACCT AGCAAGTCGT
GGCGCAAAGG TGATCGCTGG AGAGCACAGC AATCCGGCAG TGCTTGAGCA GGCGGTGCAT
GGAGCCGATG CGCTGTTCTG GTTGACGCCC CCGGATATGA CCTCGCATGA TCCATTGGGC
ACGGCTCGCC GCATGGCTGA GGCCGCGGCG AGCGTTATCC GCAAGCATCC GGATCTACAT
GTGGTTCAGC TGTCGAGTGC AGGAGCATTC CTGCCGAGCG GCACCGGGCC GATTGTTGGA
CATCATGACA CGGAAGAGAA GTTCCGCGCT GCCGGCAAGA ACATCGTCTC TCTGCGGCCG
AACGAGTTCA TGGAGAACGT GTTTTTCTCG CTGCCGTCGA TCATTGGACA AGACAGCATC
TTCACTTCGA TTCCGGGATC GGTGAAAGCG CCATTCATTG CCACCCAAGA CATAGCCGAG
GTTGCCGCTG AGTTTCTGCT CAGGCCGATC AACGGCCATC ACGTGATCGA TATCGTGGGC
CCGCAGGAGA TTTCGCTCGA CGAGTGGGGG AGCATCGCAG GACAGGCCAT AGGGAAACAA
ATTCGGGTGG TCACCATCCC GGGCGATCAG TTGAAGGCCG CAATGACGCA GGTCGGGATG
TCGCCGGAAA TGGCGGCGCT GCTGGTTGAA ATGGAAGAGG CGTATCCCAA AATACAACAA
CTTAAAGGCG AACAAAAACG CACCGGCAAA GTTACGTTCC AGCAATTTGC TCGGGATGTG
TTCGCGCCGG GATTTAAGAG AGCCGTGCAG TCAGCGGCGT AG
 
Protein sequence
MKRETKPAHL DSKEKNPMKI VVTTPTGHIG NKLANILLDR KSDVTLIARH PEKVKDLASR 
GAKVIAGEHS NPAVLEQAVH GADALFWLTP PDMTSHDPLG TARRMAEAAA SVIRKHPDLH
VVQLSSAGAF LPSGTGPIVG HHDTEEKFRA AGKNIVSLRP NEFMENVFFS LPSIIGQDSI
FTSIPGSVKA PFIATQDIAE VAAEFLLRPI NGHHVIDIVG PQEISLDEWG SIAGQAIGKQ
IRVVTIPGDQ LKAAMTQVGM SPEMAALLVE MEEAYPKIQQ LKGEQKRTGK VTFQQFARDV
FAPGFKRAVQ SAA