Gene Acid345_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3856 
Symbol 
ID4071008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4565461 
End bp4566258 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content57% 
IMG OID637985880 
Productsignal peptidase I 
Protein accessionYP_592930 
Protein GI94970882 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGA AAACCATCGA AAAAGTACAG GAAACGAAGA CCGAGAAGCC CGCGAAGAAG 
AAAGAGACCA CGGCGGAATT CATCTCTTCC ATGGCCGCGG TGCTCGTCAC CGGCCTCTTC
ATCATCACCT TCTGCATGCA GGCCTTCGAA ATCCCCTCGG GCTCGATGGA GAATACTCTG
CTCATCGGGG ACCACCTCTT CGTGGACCGC GGGTTACTCG CGCCCAAGAC CAAGTGGATG
CCGCTGATTC CTTATCAGCA GGTGCACCGC CGCGACATCA TCGTGTTCGT CTCGCCCGCG
CAGCCCGGAC TTTATCTCGT GAAGCGAGTC ATCGGCGTTC CCGGCGACCA CATTCATCTG
AAAGATGACG TCGTTTACAT AAATGGGCAG GCCCAGGAAG AGAAATACAA GTACCTCGAC
CCACACCCGC GGGGCGGTTA CGTCCCCTAT GCAACGAACT TCCCGTCGAT CTCGCCGGAA
GAGTCCAGCG TGCCACTCAA TCCGGAATGG CAATTGATGT TGAGCTCGCA TCTCGAGAAC
GGTGACCTCA TCGTTCCTCC CGACAGCTAC TTCGCGATGG GCGACAACCG CGAGAACAGT
TGGGATGGCC GCTTCTGGGG CTTCGTCCCG AAGGAAAATC TCATTGGCCG CCCGATGTTC
ATCTATTGGT CGTTCATCAC GCCGGAAGAC CAGTACACCA AGCAGGGCAT GGGCGACCGC
CTCGGCTTCA TCGTCCACAT TGTGATTCAC TTCTTCGATG AAACGCGCTG GTCCCGCATG
TTCAGGCTGG TGCACTGA
 
Protein sequence
MSPKTIEKVQ ETKTEKPAKK KETTAEFISS MAAVLVTGLF IITFCMQAFE IPSGSMENTL 
LIGDHLFVDR GLLAPKTKWM PLIPYQQVHR RDIIVFVSPA QPGLYLVKRV IGVPGDHIHL
KDDVVYINGQ AQEEKYKYLD PHPRGGYVPY ATNFPSISPE ESSVPLNPEW QLMLSSHLEN
GDLIVPPDSY FAMGDNRENS WDGRFWGFVP KENLIGRPMF IYWSFITPED QYTKQGMGDR
LGFIVHIVIH FFDETRWSRM FRLVH