Gene Acid345_3783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3783 
Symbol 
ID4071067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4471500 
End bp4471976 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content54% 
IMG OID637985806 
ProductDMT family permease 
Protein accessionYP_592857 
Protein GI94970809 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.410405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.488499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAC TCGCAAACGA CAGCGCGGAA AACGTGCGGG CCAAATCATC TCGAATCGGA 
GACTCCGTGA AGACCTGGTA TCTCTACGCG TTACTGACGG TTTTGATGTG GGGTGTGTGG
GGAGTTTTCA GCAAGTTGGC TTCGGCTTAC TCAAAGCCAA GGCAAATACT GCTCTTCCAA
TCAGCGGGCG TGCTCGCGTT CGCCGTCGTG GTCTTGCTTC TGGAGAGGTT TCACATCGAA
TGGTCGCGCC CGGGATTCAC ATGGTCGTTC CTAGCCGGGT TCTTCACCTT CGTCGGCTTC
CTGACCTTCT TCGCCGCGCT CGAGAACGGA AAAGCGTCAA CCGTCGTGAC ACTCTCAGCG
CTCTATCCAG TAGTAACGAT TTTGCTGAGC GTGATTTTCC TGCATGAAAA GGTGTCGCTG
AAAGAAGGCT TAGGAATTGT GTTCGCGTTA GTTGCGTGTG CGCTTCTCGC GTCGTGA
 
Protein sequence
MPELANDSAE NVRAKSSRIG DSVKTWYLYA LLTVLMWGVW GVFSKLASAY SKPRQILLFQ 
SAGVLAFAVV VLLLERFHIE WSRPGFTWSF LAGFFTFVGF LTFFAALENG KASTVVTLSA
LYPVVTILLS VIFLHEKVSL KEGLGIVFAL VACALLAS