| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3711 |
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| Symbol | |
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| ID | 4070461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4384996 |
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| End bp | 4386909 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637985734 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_592786 |
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| Protein GI | 94970738 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.731459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTCAC CTGATCTTTC CAGCAAAATT GATGCGTTTC CCGAGCCGAC GCTTTTAATC
GACCGCACCG GAACGGTTGT CGCTTCTAAT CGGAGTGCGT CGCAGTTGCT GCGGTTATCA
TCGGCGAGAA TCATCGGGAA ACCCCTTCGT AAGCTCGTTC GTGAGGATCC CGAGAAGCTG
GCGGGATACA TTCGCGGCTG GCTGCGCAAT TCCAAACAGG CCTCGGACAA GCGGACCACG
CTGACGGTCC TTCCCAGGGA TGGGCGAGAG ATTGTTTGCA GAGCTGTAGG AGCATTATTG
CCGGCTCGCG TGGATCAACC CCGCCTGCTT TGCCTTAGGT TTCTAGCTCT TACAATGACC
GCGACAGAGC AACGCGAACC GCATCTCCTT TCCGCGTGTA AAAAGCAAGC GCAACCGCAA
GCCGATCAAA GATGGCGAAC TGCCTTCGAG AACGCGGCGA TCGGAATCGT CATGGCGGAC
TTTAATGGTC GCTATTTCTC TAGCAATGCT GCGTTCCGCA GAATGTTGGG CTATACCGAG
GCCGATCTCT ACCGATTAAC CTTCGATGAA GTCACGTTCG AGGGTGACCG TGAAGCTAAT
CTGTTGTTGG TCCGCGAGCT CGTAGGCGGC AAACGACGAC ACTTCGAACT CGAGAAGCGC
TACCGCCGCA AAGACGGCAC TTTGCTTTGG GTACGGCAAC ACGTTGCACT AGTTCCAGGA
ATGCAAGGTG TTGCGCCATT TTGGCTAGGT GTTGTCGAGG ACATTACCGA CGGCAAGCGC
GTTGAACATG AGCTCAGCGT GCAGCGACAG AAATTTCTTG AGAGCGAGGC GCGGCTGCAG
GCGTTTTTTG AAAATAGCCC CAACCCGATT TTCATTAAAG ATCGAGAGGG CCGATATCTC
CACGTTAATA GAGAATTCAA ACGAGTTCTC TGCTCCGCGC AAAAACGAGT CCTAGGAAAG
AGAGACGACG AACTGTTCTC AGCCGAACAG GCCGCTGCTT TTCAGGCCAA TGACCGGCAG
GTGCTCGAAG CTGGCGTTCC GATGGAATTT GAGGAGACCG CTTTCGAAGA AGATGGGCAG
CACACCAGCA TCGTCCAGAA GTTTCCGCTA TTGAATGCGG AGGGAGAGAT TTACGGCATT
GGCGGCATTG TTACCGATAT CACTGAGCGT AAGAAATCGG AATCCGCGCT TCGATTCAGT
GAGGAGTCGT ATCGCGTTGT GGTCGAAACG GCCAACGATG CCGTTATCAG CACAGACGAA
ACCGGCACGA TCCGTTTTGC CAATTCCACT ACTTCGAGAG TCTTTGGATA TGACTCAACT
GAGCTGATCG GGAAGCCCTG GACTGTGCTG ATGACAGAAC ACCTGCGCCA GGTACATGAG
GCCGGATTCA GACGCTACTT GGAAACTGGC GTGCGGCATA TGAACTGGCA AGGTACCGAG
CTGGTTGGAC TGCACAAGAA TGGGAGAGAG TTCCCGGTAG AGATTTCAAT CGGAGAGCTT
GCCCGGAGTG GCCGGCGGAT GTTCACCGGC TTTATCAGAG ATATCAGTGA AAGAAAGCAG
GCAGAAGAAA TCCGAACCAC TGCATTTGAA TTCCTCACGA AGCCATTCAG CGATCAGGAT
CTGCTGGAGG CGATTCGCAT CGCACTGGAG CGACATCGCC ATAAGCAGGG ACACGAGCAA
GAGCTGGCGA AGCTTCGACG GCGCTTCGGG TTCTTGAGCT TCCGGGAGCG GGAAGTAACC
TCTATGGTTG TTTCGGGCAT GGCCAACAAA CAGATCTCCG TTAAACTCGG GATATCGGAA
AACACCGTTA AGGTTCACAG GAGTCGAGCA ATGAAGAAGA TGCAGGCCCG GTCTCTTCCT
GAGCTCGTCA GAATGATGGA ACAGCTGAAA GACTTTTTTG AAAAGCCAGC GTAA
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| Protein sequence | MGSPDLSSKI DAFPEPTLLI DRTGTVVASN RSASQLLRLS SARIIGKPLR KLVREDPEKL
AGYIRGWLRN SKQASDKRTT LTVLPRDGRE IVCRAVGALL PARVDQPRLL CLRFLALTMT
ATEQREPHLL SACKKQAQPQ ADQRWRTAFE NAAIGIVMAD FNGRYFSSNA AFRRMLGYTE
ADLYRLTFDE VTFEGDREAN LLLVRELVGG KRRHFELEKR YRRKDGTLLW VRQHVALVPG
MQGVAPFWLG VVEDITDGKR VEHELSVQRQ KFLESEARLQ AFFENSPNPI FIKDREGRYL
HVNREFKRVL CSAQKRVLGK RDDELFSAEQ AAAFQANDRQ VLEAGVPMEF EETAFEEDGQ
HTSIVQKFPL LNAEGEIYGI GGIVTDITER KKSESALRFS EESYRVVVET ANDAVISTDE
TGTIRFANST TSRVFGYDST ELIGKPWTVL MTEHLRQVHE AGFRRYLETG VRHMNWQGTE
LVGLHKNGRE FPVEISIGEL ARSGRRMFTG FIRDISERKQ AEEIRTTAFE FLTKPFSDQD
LLEAIRIALE RHRHKQGHEQ ELAKLRRRFG FLSFREREVT SMVVSGMANK QISVKLGISE
NTVKVHRSRA MKKMQARSLP ELVRMMEQLK DFFEKPA
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