| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3544 |
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| Symbol | |
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| ID | 4069276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4192723 |
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| End bp | 4195560 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637985567 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_592619 |
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| Protein GI | 94970571 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0810782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTC CCTCCAATGA AGCCAAAGTC GTCGCCTTTG GCCTCTTCAA AGCTGACCTC
AACGCCCGTT CCCTGACCAA GGGAGGCGCC TCCGTGCGTC TGCAGGACCA ACCTTTCGAG
GTGCTGGGTC TTCTCCTGGA GCGTCCCGGG GAAATCGTCA GCCGGGAGGA GATCCGCCAG
CGGCTTTGGT CGTCGGATAC GTTCGTCGAG TTCGACGATG GTTTGAATAC AGCTATAAAG
AAGTTGCGCA CCGCCCTGGG AGACAGCGCC CTCAACCCGC GCTTTGTCGA AACCGTTCCC
CGGCGGGGAT ATAGGTTTAT CGCCCCAGTG TCGGTTCTGT CGCCGGTGGC CACGCCCGAA
CCTGAGTCGC AAACTGAGGA TGTGGTCATC GCCTCCCGGG AGCGCTCGCA AATCACCATT
ACCCAGCCGC ATCATCCGGT TTTCTGGAGC ACCGTCGCGC TGGGGCTGGC GATCTCGTTC
CTCGCCGGCG GGTGGTACTA CCGCTCCCGC TCCGGATCAG ACTCGGTGGT AAGCGCTGCG
CCGATCCGCA TGCGTCCGGC GGTGGCTGTT CTTGGCTTCC ATGATTTGAC CGGCCGACGA
GATACTGCGT GGCTTTCCAC CGCCATCGCC CAGATGCTTT GCACCGAACT CGGCGCTGGC
GAGCAGTTGC GCATGGTTTC CGGCGAGCAA GTCGCGCGCG CTCGCAAGGA AGTGGCGTGG
GACCGCGAAG ATACGCTGGA AAAGGCGTCA CTTACCAAGC TGCGGTCGAG ATTGGGGTCG
GATTACGTCG TAATTGGCGC GTATACCGTG GTGGATTCGC CGGCCGGTCC ACAAATCCGA
CTGGATGTGC GCCTTCAGGA CGCCCGCGCC GGTGAAACGC TTCTGGAAGA ATCCGATACC
GGCAACCAGT CCGAGCTATT TGCGTTGGTT TCGCATACCG GTCAGCGTCT GCGCGACCGG
CTTGGCATTG ACCGCGCCAA CGGCGATCAC GACGCCCAGA TTCGCGCCTC TCTGCCGAAG
AACGTTGAGG CCGCACGCCT CTACTCCGAG GGTGTCGCGC AATTGCGCGA TGGCAACGCC
GTCCAAGCCC GCGATTTGTT GACGAAAGCC ATCGCCATCG AGCCAGAGCA CGCACTTTCG
CACGCTGCGC TCGCCGAGGC CTGGACGATG CTCGGTTATG ACTCGCGCGC CAGCCAGGAA
GTCCAACTCG CGTTCAATCT CTCGCAGGAC CTTTCGCGCG AGACCAAGCT CTCCATCGAA
GGCCGCTACC GCGCATTGGC CCACGACTAT CCCAAGGCAA TTGAGATTTA TCGCAAGCTG
CGCGACCTCT ATCCCGATAA CATTGATTAC GCGCTGGTTC TCGCGCGGGT GCAGAACAAG
GGTGGGTTGC CGAAAGACGC GCTCCTGACC ATCGCGACGA TGCGGCAGAT TCCCGGGACG
GCCAGCCATG ACCCGCGCAT AGATCTCGCC GAGGCGTCGG CTGCCGAGAC GCTCAGCGAC
TTCCAGCGGA GCCTGCAGGC GGCCTCCGTC GCCGCGGTTA AGGCTGAATC CGAGGGACGC
ACGCAAGTCG TGTTGGAGGC CCGCGCCAAG CAGATCTGGG ATTACGATCG CCTCGGCGAT
TTCGATAAAG CGATGGCCGC CGCCAAGAGC AGCGTGGAAC TAGCCAAGGC CAGTGGCAAC
GAACGCGAAA TGGCCACCAT GCAACACACC ATGGGTCATC TGGAATACGA CCAGGGTGAT
CTGCCGGGAG CCGTACGCGA TTACGAGGCC GCACTTCGCG AGTTCCGCAA ACTTGGGGCG
CTGTGGGACA CCGCCTCCTG CGCCCACAAT CTCGGCGTCG TCTACCAGGA CCAGGGACTG
ACTCAACAGG CGCGCACCTA TATGGAAGAG GCCCTGCGCA TTCAGCGTGA GATCAACGAT
GAACGCGGCG TCGCCTCCGA TCTCGACGAT CTCAGCAACA TCCTGCTCAG CACCGGAGAC
CTCGACGCAG CCCTGCGCAT GAAGCAGGAG GCGCTGCAAA TCTTCCAGAA GCTCGGCAAC
CGCATGGGCG AATCAATTAC CCTCGGCAAT CTTGCCGAGG TGTACCTCGC GAAAGGCGAT
CTCGCCGCCG CCAAGGACAG CTACGACCAT TCCTACGCGC TTAAACAGCA GATCGGTTAC
AAGCGCGGCT ATGGATACAG TCTCTCCGGC ATCGCCAACA TCCTTATATT GCAGGACAAA
CTGGCCGAGG CGCAGACCAC CGCCAACCAG GCATTGGCGG CGCGCCAGGA ACAGAAAGAT
GAGAGCAACA TCCAGCTGAG CCGCGCGCAA CTCGCGGAGA TCGCCCTTGA ACAGGGCCAG
AACGATGTCT CGGTTTCGCT CGCAGGCGAG ACGACGAAAT ACTTCGACAA GCAGCATGCC
CCCGCCAGTT CGACCTACAG CTACGCGGTC CTCGCGCGCG GATTAGCGCA GCAAGGCAAA
TCCGGCGAAG CGCTAACCAA CGCCCAACGT TCACTCACGA TCTCGAAACA AACCGGGGAC
CTGATCACTA ACTTCGGCTC GCAACTCGCG CTGGCAGAAT CGCAAGCTGC CGCCGGACAG
AAGCCCGCCG CCGTGCACAC GCTGCAAGCG TTGCAATCCC GCGCACACGC CGCCGGTGTC
GTTCGGTATG AACTCGAAGC CCGGTTACGC TTAGCCGAAC TACAGGGGGA CGGCGCCTCT
GCGCAGCGTC AACTTGATGA AGTACACCGC GACGCCGCGG CACGCGGATT CCTGCTGATC
GCGAGGAAGG CGGCGGGAAG TCGGGCGCAA ATCGCGGCAG TTGCGCACGT ACCGGATATC
CCGTCTGCGC GACATTAG
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| Protein sequence | MELPSNEAKV VAFGLFKADL NARSLTKGGA SVRLQDQPFE VLGLLLERPG EIVSREEIRQ
RLWSSDTFVE FDDGLNTAIK KLRTALGDSA LNPRFVETVP RRGYRFIAPV SVLSPVATPE
PESQTEDVVI ASRERSQITI TQPHHPVFWS TVALGLAISF LAGGWYYRSR SGSDSVVSAA
PIRMRPAVAV LGFHDLTGRR DTAWLSTAIA QMLCTELGAG EQLRMVSGEQ VARARKEVAW
DREDTLEKAS LTKLRSRLGS DYVVIGAYTV VDSPAGPQIR LDVRLQDARA GETLLEESDT
GNQSELFALV SHTGQRLRDR LGIDRANGDH DAQIRASLPK NVEAARLYSE GVAQLRDGNA
VQARDLLTKA IAIEPEHALS HAALAEAWTM LGYDSRASQE VQLAFNLSQD LSRETKLSIE
GRYRALAHDY PKAIEIYRKL RDLYPDNIDY ALVLARVQNK GGLPKDALLT IATMRQIPGT
ASHDPRIDLA EASAAETLSD FQRSLQAASV AAVKAESEGR TQVVLEARAK QIWDYDRLGD
FDKAMAAAKS SVELAKASGN EREMATMQHT MGHLEYDQGD LPGAVRDYEA ALREFRKLGA
LWDTASCAHN LGVVYQDQGL TQQARTYMEE ALRIQREIND ERGVASDLDD LSNILLSTGD
LDAALRMKQE ALQIFQKLGN RMGESITLGN LAEVYLAKGD LAAAKDSYDH SYALKQQIGY
KRGYGYSLSG IANILILQDK LAEAQTTANQ ALAARQEQKD ESNIQLSRAQ LAEIALEQGQ
NDVSVSLAGE TTKYFDKQHA PASSTYSYAV LARGLAQQGK SGEALTNAQR SLTISKQTGD
LITNFGSQLA LAESQAAAGQ KPAAVHTLQA LQSRAHAAGV VRYELEARLR LAELQGDGAS
AQRQLDEVHR DAAARGFLLI ARKAAGSRAQ IAAVAHVPDI PSARH
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