| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3479 |
|---|
| Symbol | |
|---|
| ID | 4069055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4103590 |
|---|
| End bp | 4105197 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637985501 |
|---|
| Product | ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_592554 |
|---|
| Protein GI | 94970506 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0481507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.481436 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCTG TTTCAAACGT AACCATGCGC TACGGCGCAA AAATTTTGTT CGAAGAAGTC
TCCGTCTCCT TCATCCCCGG ACGCCGCTAC GGCCTCACTG GCCCCAACGG CTCCGGCAAA
TCGACGCTGA TGAAGGTCCT CTCCGGCGAG CTCGAGCCCC AGAAGGGCAA CGTCGTTCGC
CCGAAAAAGC TCTCCGTCCT CAAGCAGGAC CAGTACGCCT TCGACGAATT CCGCGTCATC
GACACCGTGA TCATGGGCAA CAAGGGCCTG TGGGCCGCCC TCGCTGAGCG CGAAGTGCTC
TACGCCAAGC CCGACCTTAC CGACGACGAC GGCATCCGCC TCGGTGAGCT CGAAGGCATT
GTCGGCGACG AAGACGGCTA CACCGCCGAA TCCGACGCCG CGATCCTGCT GCAAGGTCTC
GATATCCCCG ACAGCTTTCA CGAGCGCAAG ATGTCGGAGC TCCAGGGCGG CCAGAAAGTC
CGCGTGCTGC TCGCACAAGC CCTCTTCGGC AAGCCGCAAG CGCTGCTCCT CGACGAGCCC
ACCAACTCGC TCGATCTCGA CTCCATCCAC TGGCTGCAGG ACTTCCTCAA TCGCTTTGAA
GGAACGATGA TCGTCATCTC CCACGATCGC CACTTCCTCA ACAGCGTCAC CACCCACACC
GCCGACATCG ACTACCAAAC CATCATCACC TACACCGGCG GCTACGACGA GATGGTCGTC
GCCAAGACGC AAGTCCGCTC GCGCATCGAA TCCGAAAATT CCCAGCGCGA AAAGAAGATC
GCGCAGCTCA ACGAATTCAT CGCGCGCTTT TCAGCCGGCA CGCGTTCAAG CCAGGTGACG
TCGCGTAAGA AAGAAGTAGA GAGACTTCAG ACCACCGAAC TCGCGCGCTC CAACATTCAG
CGCCCCTACA TTCGCTTCGA CCAGGTGCGG CCGTCGGGAC GGCACGTGCT CGAATTCGCC
GGTGTTCATA AGGCTTACGG TGAACACAAG GTCATCACCG GATTCAGCGC GGCACTGCAG
CGCGGCGAAA AAATCGCGCT CATGGGACGC AACGGTCTCG GCAAAACTAC GCTGCTGCGC
GCGCTGCTGG CCAACGCGCC GGGCCTCGAT GACTACGGGT TTGGCATCGA TCACGGCACG
GTGAAGTGGG GACACGAAGC GCAGATCGGC TACTTCGCGC AGGACCACAC CGGCACGATT
CAACATGGAA TGACGGCCGC CGATTGGCTG CAGCAGTTCG ATGCGAAGGC GAGCAAAGAA
GAAATCCGCG GACTGCTTGG GCAGATGTTG TTCAGCGGAG AAGAAGGCCT GAAGCCGACC
GCGGCGCTGA GTGGCGGCGA AACCGCGCGC CTGATTTTCT GCAAGCTCAT GCTGCAGAAG
CCCAACATTC TTGTGCTCGA CGAGCCTACG AACCACCTGG ATTTAGAGTC GATCAACGCG
CTCAACATCG CGCTGCAGCG CTACGAAGGC ACGCTGTTAT TGGTCACGCA CGACCACGAT
GTGATCGATG AAGTAGCGAC GAGAATCTGG CACTTCGAGC CGGGGAAGAT TGAAGACTTC
CAGGGCCCGT ACGAAGAATT CCAGTCCCAC AGTTCAGCAA CTGCTTAA
|
|---|
| Protein sequence | MLSVSNVTMR YGAKILFEEV SVSFIPGRRY GLTGPNGSGK STLMKVLSGE LEPQKGNVVR
PKKLSVLKQD QYAFDEFRVI DTVIMGNKGL WAALAEREVL YAKPDLTDDD GIRLGELEGI
VGDEDGYTAE SDAAILLQGL DIPDSFHERK MSELQGGQKV RVLLAQALFG KPQALLLDEP
TNSLDLDSIH WLQDFLNRFE GTMIVISHDR HFLNSVTTHT ADIDYQTIIT YTGGYDEMVV
AKTQVRSRIE SENSQREKKI AQLNEFIARF SAGTRSSQVT SRKKEVERLQ TTELARSNIQ
RPYIRFDQVR PSGRHVLEFA GVHKAYGEHK VITGFSAALQ RGEKIALMGR NGLGKTTLLR
ALLANAPGLD DYGFGIDHGT VKWGHEAQIG YFAQDHTGTI QHGMTAADWL QQFDAKASKE
EIRGLLGQML FSGEEGLKPT AALSGGETAR LIFCKLMLQK PNILVLDEPT NHLDLESINA
LNIALQRYEG TLLLVTHDHD VIDEVATRIW HFEPGKIEDF QGPYEEFQSH SSATA
|
|---|
| |